{"id":"W4413022300","doi":"10.3897/neobiota.100.143736","title":"Transparency and reproducibility in invasion science","year":2025,"lang":"en","type":"article","venue":"NeoBiota","topic":"Species Distribution and Climate Change","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Universität Wien","keywords":"Reproducibility; Transparency (behavior); Computer science; Chemistry; Chromatography; Computer security","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.7248979,0.001299584,0.004285776,0.01220482,0.01049703,0.03029925,0.00811743,0.01029387,0.007455624],"category_scores_gemma":[0.8643846,0.002416969,0.004333366,0.01205252,0.07063678,0.03818118,0.02658478,0.0159886,0.001533271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01341465,"about_ca_system_score_gemma":0.04824965,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00520289,"about_ca_topic_score_gemma":0.003890291,"domain_scores_codex":[0.1532381,0.6705962,0.05943391,0.02764605,0.08402541,0.005060436],"domain_scores_gemma":[0.02665708,0.7770817,0.03896653,0.1101838,0.04505627,0.002054556],"domain_codex":"methods","domain_gemma":"reproducibility","domain_candidate":"reproducibility","domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.000581402,0.0001817144,0.02387166,0.01116843,0.001103853,0.0005328358,0.04506164,0.004100486,0.001396052,0.6954167,0.02122494,0.1953603],"study_design_scores_gemma":[0.0001915141,0.0003652483,0.01403037,0.01249285,0.0004490848,0.0005593328,0.007845728,0.003526771,0.003407273,0.8248289,0.1319659,0.0003370673],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.05116461,0.03160455,0.4473141,0.3200192,0.008612123,0.004338499,0.002598144,0.001131595,0.1332171],"genre_scores_gemma":[0.7584858,0.007189706,0.1776541,0.03818137,0.004189986,0.007948779,0.001044391,0.0009015606,0.004404275],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.2751021,"threshold_uncertainty_score":0.3392499,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02301692043601503,"score_gpt":0.2728773992540248,"score_spread":0.2498604788180098,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}