{"id":"W4413112054","doi":"10.1128/spectrum.01553-25","title":"Analysis of <i>Neisseria gonorrhoeae</i> and <i>Mycoplasma genitalium</i> from nucleic acid amplification test specimens, Nunavut region of Inuit Nunangat, Canada, 2020–2023","year":2025,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Government of Nunavut; University of Alberta; Public Health Agency of Canada","funders":"","keywords":"Mycoplasma genitalium; Neisseria gonorrhoeae; Nucleic Acid Amplification Tests; Genetics; Biology; Chlamydia trachomatis; Virology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002942422,0.0003032942,0.0008546594,0.0006458519,0.0001772935,0.00001511485,0.0003945207,0.0003867473,0.0006692069],"category_scores_gemma":[0.000267133,0.0002998719,0.00017308,0.001752443,0.0007344583,0.00007909405,0.000199181,0.0004425419,0.00005561901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003018275,"about_ca_system_score_gemma":0.0005646198,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1667953,"about_ca_topic_score_gemma":0.4973143,"domain_scores_codex":[0.9975933,0.0003303791,0.0007464329,0.0008329184,0.00002243516,0.0004744656],"domain_scores_gemma":[0.9978769,0.0005794676,0.000384567,0.0009277852,0.000197274,0.00003398519],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001605908,0.000185241,0.1738923,0.00002495491,0.001914429,0.000002820273,0.0001327992,0.000013269,0.8184071,0.0003071825,0.004566573,0.0003926682],"study_design_scores_gemma":[0.0008943437,0.0002074831,0.2313047,0.00003837473,0.0009934744,0.0001393589,0.0003060874,0.00001339598,0.7470992,0.0002652378,0.01842861,0.0003096971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9912617,0.00439371,0.00006799801,0.001030782,0.000563612,0.0004113444,0.001490082,0.00003787741,0.0007428903],"genre_scores_gemma":[0.9960552,0.000348955,0.000055108,0.00009920191,0.00002959934,0.00002405103,0.0009404501,0.00001926854,0.00242819],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.330519,"threshold_uncertainty_score":0.9999453,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006256898116286301,"score_gpt":0.2239819764560516,"score_spread":0.2177250783397653,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}