{"id":"W4413140938","doi":"10.1093/femsec/fiaf082","title":"Antimicrobiota vaccine induces lysine-mediated modulation of tick immunity affecting <i>Borrelia</i> colonization","year":2025,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Collectivité de Corse; Université Paris-Est Créteil Val-de-Marne; Agence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail; Agence Nationale de la Recherche","keywords":"Biology; Tick; Microbiology; Borrelia; Pathogen; Immunity; Microbiome; Tick-borne disease; Metabolite; Virology; Antibody; Immune system; Immunology; Borrelia burgdorferi; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005146163,0.0004282255,0.0009339603,0.0006777904,0.0004046367,0.00001455531,0.000468345,0.00118543,0.0006408333],"category_scores_gemma":[0.001009564,0.0004338184,0.0001936468,0.0009349816,0.000482105,0.0001306594,0.0003333155,0.0006073774,0.0003932801],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002017106,"about_ca_system_score_gemma":0.0003259734,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003734901,"about_ca_topic_score_gemma":0.0005599849,"domain_scores_codex":[0.9966859,0.0009915745,0.0009333293,0.000662061,0.00001831397,0.0007088156],"domain_scores_gemma":[0.9972052,0.001076614,0.0006470511,0.0005839028,0.000456149,0.00003109144],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002447202,0.0005394274,0.1238162,0.00005691603,0.0006063201,0.000003651882,0.000145835,0.0002118633,0.8654333,0.000226165,0.008211009,0.0005046172],"study_design_scores_gemma":[0.00474591,0.0007196123,0.547317,0.0001021433,0.0003684261,0.000213191,0.0001824828,0.00005837086,0.4385312,0.0001606313,0.007043425,0.0005575676],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927412,0.001458504,0.0002840644,0.0004806001,0.003241447,0.0007621401,0.0002112279,0.0002625151,0.0005583466],"genre_scores_gemma":[0.995819,0.0001310451,0.00008593513,0.0006957909,0.00004114646,0.00004028821,0.00253815,0.00003498312,0.000613606],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.426902,"threshold_uncertainty_score":0.9998114,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006323787618164265,"score_gpt":0.2319309610475415,"score_spread":0.2256071734293773,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}