{"id":"W4413367424","doi":"10.1002/tpg2.70095","title":"Better together: Subgenomes for allotetraploid potato wild relative <i>Solanum acaule</i> Bitt. reveal origins in <i>Petota</i> Clade 3 and 4","year":2025,"lang":"en","type":"article","venue":"The Plant Genome","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Fredericton; Agriculture and Agri-Food Canada; McGill University; Ste. Anne's Hospital","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Alliance de recherche numérique du Canada; Direktoratet for Utviklingssamarbeid; Génome Québec","keywords":"Biology; Genome; Clade; Solanum; Solanum tuberosum; Genetics; Gene; Botany; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000285834,0.0001888549,0.0002580379,0.00002475128,0.0002614599,0.0000519668,0.0002984517,0.0001141758,0.00001523645],"category_scores_gemma":[0.00001753199,0.00006571964,0.00007682968,0.0003044077,0.00008619524,0.00007521288,0.00007071771,0.0002024458,0.000008859884],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004050524,"about_ca_system_score_gemma":0.00001374459,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001126487,"about_ca_topic_score_gemma":0.001231586,"domain_scores_codex":[0.9988159,0.00008206601,0.0002505659,0.0003398661,0.0001152616,0.0003963672],"domain_scores_gemma":[0.9992343,0.0005281795,0.00007526539,0.00008079166,0.00002084637,0.00006061103],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001864137,0.00004661724,0.007489312,0.00002347251,0.00004597068,0.00001951202,0.0001975654,0.000005614987,0.9867583,0.002027242,0.001201908,0.001998061],"study_design_scores_gemma":[0.0005998349,0.0002155538,0.3408358,0.0001126666,0.00005978904,0.00004867104,0.0004155071,0.00005232392,0.003939235,0.005624609,0.6476176,0.0004783388],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.987013,0.002575032,0.00001446663,0.006730779,0.0001084592,0.0004904394,0.001801075,0.00003778038,0.001228919],"genre_scores_gemma":[0.9938189,0.0009529126,0.0001854512,0.00238105,0.0001729344,0.00004136157,0.0002256464,0.00000229514,0.002219459],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9828191,"threshold_uncertainty_score":0.2679969,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0137412708118859,"score_gpt":0.2027440851290453,"score_spread":0.1890028143171594,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}