{"id":"W4413378203","doi":"10.1101/2025.08.12.669747","title":"Genomic resources for comparative analyses of obligate avian brood parasitism","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Royal University","funders":"","keywords":"Obligate; Brood parasite; Parasitism; Biology; Evolutionary biology; Brood; Computational biology; Zoology; Genetics; Ecology; Host (biology)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002707551,0.001969645,0.001800637,0.007562422,0.001724094,0.001572891,0.002276004,0.001459133,0.02972868],"category_scores_gemma":[0.006173899,0.001651145,0.001684225,0.01199599,0.0004347536,0.001051493,0.002311696,0.002142523,0.01909927],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008190192,"about_ca_system_score_gemma":0.002442979,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004897986,"about_ca_topic_score_gemma":0.01449946,"domain_scores_codex":[0.9986764,0.0002154001,0.000178959,0.0004542055,0.0003155317,0.0001595286],"domain_scores_gemma":[0.9960156,0.001275979,0.0007584194,0.0009078438,0.0006057778,0.000436254],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004095729,0.0006755735,0.01887259,0.01434503,0.001969059,0.00257698,0.003309145,0.006830662,0.495411,0.01742911,0.2500701,0.184415],"study_design_scores_gemma":[0.001532895,0.0007027113,0.1523519,0.001647951,0.001881829,0.001447909,0.0006547032,0.008235896,0.05794026,0.01627991,0.75695,0.0003741848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0272604,0.001661058,0.0684332,0.0002379622,0.000235529,0.0005664199,0.8709558,0.01602499,0.01462465],"genre_scores_gemma":[0.01643687,0.0005692051,0.0661532,0.0001261346,0.00006873459,0.0008100618,0.911537,0.002748184,0.00155057],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.02972868,"threshold_uncertainty_score":0.09945232,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02960040269453438,"score_gpt":0.2862280525011031,"score_spread":0.2566276498065687,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}