{"id":"W4413703064","doi":"10.1111/mec.70088","title":"Persistent Genomic Erosion in Whooping Cranes Despite Demographic Recovery","year":2025,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"H2020 European Research Council; Research Executive Agency; Natural Environment Research Council; Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; European Commission; U.S. Fish and Wildlife Service; Chester Zoo; Howard Hughes Medical Institute; Danmarks Grundforskningsfond; National Research Foundation; U.S. Geological Survey; James Hutton Institute","keywords":"Biology; Inbreeding; Genetic erosion; Genetic diversity; Endangered species; Population bottleneck; Effective population size; Runs of Homozygosity; Population; Conservation genetics; Ecology; Evolutionary biology; Zoology; Demography; Genetics; Habitat; Allele; Microsatellite; Single-nucleotide polymorphism; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002786015,0.0001836388,0.0002224087,0.0009491195,0.0004779272,0.0007175821,0.0002887551,0.0003441727,0.0007641023],"category_scores_gemma":[0.001063957,0.00018271,0.0001997164,0.001312281,0.0007053464,0.0002905077,0.0004049657,0.000408641,0.0001689496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007009292,"about_ca_system_score_gemma":0.0004729146,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03547901,"about_ca_topic_score_gemma":0.08264171,"domain_scores_codex":[0.9997943,0.00001647001,0.00001062138,0.00009037608,0.00004462686,0.00004373421],"domain_scores_gemma":[0.9994722,0.00007159114,0.0002017538,0.00006094275,0.0001227314,0.00007080183],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001875818,0.00002539046,0.9384502,0.0001150246,0.0001096818,0.0005963055,0.001905089,0.001271305,0.02712571,0.0002684972,0.0005835346,0.02936173],"study_design_scores_gemma":[0.000002739455,0.00002896148,0.9963496,0.00002521569,0.00002371458,0.0002608628,0.0005729743,0.0003348512,0.0006260673,0.00008240074,0.00168541,0.000007163631],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981199,0.0002251167,0.0002633374,0.00006433709,0.000002989153,0.000004155585,0.0006094556,0.00001654663,0.000694171],"genre_scores_gemma":[0.9967971,0.0002824025,0.0007162497,0.00008452842,0.000005911628,0.00001143011,0.00167301,0.00001095661,0.0004184465],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03547901,"threshold_uncertainty_score":0.07054502,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006123687842543208,"score_gpt":0.2146581527162985,"score_spread":0.2085344648737552,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}