{"id":"W4413741319","doi":"10.1094/phytofr-08-25-0080-a","title":"Whole-Genome Sequence Analysis of <i>Magnaporthe oryzae</i> Strain RB20","year":2025,"lang":"en","type":"article","venue":"PhytoFrontiers™","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Fundamental Research Funds for the Central Universities; National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Strain (injury); Whole genome sequencing; Biology; Genetics; Genome; Sequence analysis; Magnaporthe; Computational biology; Gene; Magnaporthe grisea; Oryza sativa; Anatomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000124864,0.0004538439,0.000246704,0.0005098218,0.000163249,0.0002454661,0.0002151754,0.0001956199,0.0009725119],"category_scores_gemma":[0.0002133425,0.00009835755,0.0004082435,0.0006683825,0.00009625797,0.0001645695,0.0002163445,0.0002447839,0.0006436405],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002281731,"about_ca_system_score_gemma":0.0002753245,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003525517,"about_ca_topic_score_gemma":0.003070477,"domain_scores_codex":[0.9999287,0.000006003595,0.000008137035,0.00002387683,0.00002168895,0.00001158287],"domain_scores_gemma":[0.9998746,0.00001608241,0.00005016802,0.00001290448,0.00002411223,0.00002216435],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001357806,0.00001621034,0.001382487,0.0000768142,0.00001213334,0.0001037632,0.00003519746,0.0001079273,0.9947383,0.0000424692,0.0001124444,0.003236515],"study_design_scores_gemma":[0.00007089588,0.0006316248,0.4190203,0.00007354892,0.0003844636,0.002143568,0.000365524,0.004842426,0.545171,0.000192294,0.02705202,0.00005232687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9646564,0.001491746,0.006736987,0.0001383753,0.00003193561,0.00006136466,0.02463405,0.0003962278,0.001852973],"genre_scores_gemma":[0.8616519,0.001867076,0.02323672,0.0001566779,0.00003513149,0.00007468098,0.1099013,0.0003362929,0.002740209],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003525517,"threshold_uncertainty_score":0.007009983,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01043537051770474,"score_gpt":0.2464520148823879,"score_spread":0.2360166443646832,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}