{"id":"W4413798398","doi":"10.3347/phd.25026","title":"Genetic diversity and phylogeographic structure of Anopheles kochi, Anopheles maculatus, and Anopheles vagus: ITS2-based analysis of highland transboundary populations in the Menoreh Hills, Java, Indonesia","year":2025,"lang":"en","type":"article","venue":"Parasites Hosts and Diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"Badan Riset dan Inovasi Nasional; Korea Disease Control and Prevention Agency","keywords":"Genetic diversity; Biology; Nucleotide diversity; Anopheles; Population; Clade; Zoology; Haplotype; Phylogenetic tree; Malaria; Genetics; Genotype; Gene; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003096729,0.0001676468,0.0001647502,0.000643432,0.0002417243,0.0003660013,0.0001135909,0.00008083618,0.0005090435],"category_scores_gemma":[0.0002958665,0.00008909639,0.0001609786,0.0004550421,0.000175265,0.0001431131,0.0002035583,0.0001562116,0.0001110413],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001658103,"about_ca_system_score_gemma":0.0001967394,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003750229,"about_ca_topic_score_gemma":0.007141866,"domain_scores_codex":[0.9998481,0.00003869918,0.00001983831,0.00004755516,0.00002422564,0.00002158589],"domain_scores_gemma":[0.9998386,0.00002521236,0.0000612375,0.0000153474,0.00002114595,0.00003846069],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001721593,0.0001082803,0.9567274,0.00002630079,0.0000509018,0.0001471432,0.0008701536,0.0003088848,0.02882793,0.00006986001,0.00005311726,0.0126377],"study_design_scores_gemma":[0.000003804784,0.00005143655,0.9982893,0.000004811721,0.00001166945,0.0001942491,0.0002864275,0.0005353865,0.000467018,0.0000177821,0.0001358046,0.000002345321],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997321,0.00002107181,0.00005618925,0.000003688125,3.720653e-7,0.000002590401,0.0000468304,6.701425e-7,0.0001365548],"genre_scores_gemma":[0.9994866,0.00003228531,0.0002250342,0.000003317759,0.000001033577,0.000005504729,0.0001676333,7.717769e-7,0.00007783035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003750229,"threshold_uncertainty_score":0.007456839,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01053489136310997,"score_gpt":0.2706613090935233,"score_spread":0.2601264177304133,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}