{"id":"W4413882503","doi":"10.1016/j.apsoil.2025.106414","title":"Humalite shapes the wheat rhizosphere soil microbiome by altering microbial community structure, diversity, and network stability","year":2025,"lang":"en","type":"article","venue":"Applied Soil Ecology","topic":"Soil Carbon and Nitrogen Dynamics","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Rhizosphere; Microbiome; Microbial population biology; Community structure; Biology; Diversity (politics); Metagenomics; Ecology; Agronomy; Bacteria; Bioinformatics; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0004021522,0.00020635,0.0002904303,0.000007146659,0.002391705,0.00006452629,0.000513693,0.0002288395,0.0001846075],"category_scores_gemma":[0.00001375658,0.00009123777,0.00007023142,0.000264374,0.0003907717,0.00003754894,0.001881636,0.0004313595,0.000004289033],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006543622,"about_ca_system_score_gemma":0.00001187642,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0030597,"about_ca_topic_score_gemma":0.07169046,"domain_scores_codex":[0.9987145,0.0002609791,0.0002176392,0.0003027953,0.00007248667,0.0004316048],"domain_scores_gemma":[0.999189,0.0005092104,0.0000782411,0.0001201091,0.00003866007,0.00006478332],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002358897,0.0001852113,0.1746901,0.00005464133,0.0001786258,0.000002280855,0.0008930053,0.0001017624,0.8025113,0.00255269,0.005756354,0.01283819],"study_design_scores_gemma":[0.001107039,0.0002579326,0.9542868,0.00001890818,0.0001496445,0.00001868862,0.00229593,0.0006612776,0.0140789,0.02132158,0.005097249,0.0007060434],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971334,0.0001881443,0.000002025358,0.0006548233,0.0001944494,0.0002580714,0.0001035004,0.00007138662,0.001394184],"genre_scores_gemma":[0.997476,0.00003838242,0.00002195588,0.00218963,0.00008735756,0.00001200228,0.00009549451,0.000001579715,0.00007758156],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7884324,"threshold_uncertainty_score":0.998907,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01090354714878345,"score_gpt":0.1954987126440743,"score_spread":0.1845951654952908,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}