{"id":"W4413986946","doi":"10.1128/msystems.00157-25","title":"Migration and standing variation in vaginal and rectal yeast populations in recurrent vulvovaginal candidiasis","year":2025,"lang":"en","type":"article","venue":"mSystems","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"University of Manitoba; Manitoba Medical Service Foundation; Research Manitoba; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Biology; Population; Candida albicans; Genotype; Genetic diversity; Loss of heterozygosity; Genetic variation; Genetics; Evolutionary biology; Gene; Demography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003177011,0.0001915432,0.0002611575,0.001041242,0.0004638207,0.0005718289,0.0002541949,0.0002853424,0.0009047911],"category_scores_gemma":[0.0009943922,0.0001325369,0.0001695638,0.0009842002,0.0003063526,0.0002303648,0.0004483761,0.0003291922,0.0001824336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002140959,"about_ca_system_score_gemma":0.00008455167,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002522221,"about_ca_topic_score_gemma":0.003481662,"domain_scores_codex":[0.999683,0.0000693876,0.00002392229,0.00009564072,0.00006299259,0.0000649202],"domain_scores_gemma":[0.9994361,0.00009632135,0.000210656,0.00004326759,0.0001197803,0.00009391554],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004162055,0.00007149593,0.8790387,0.00005297968,0.0000894644,0.0004512741,0.001498773,0.0003021765,0.1005662,0.000114105,0.0001655098,0.01723315],"study_design_scores_gemma":[0.000003216191,0.0001036946,0.9960248,0.00001015353,0.00001226509,0.0005330047,0.0007268031,0.0004303165,0.001849131,0.00005407154,0.0002425045,0.00001008571],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994043,0.0001222477,0.0002223161,0.000008577096,0.000001840548,0.000003676499,0.00009184492,0.000003360134,0.000141911],"genre_scores_gemma":[0.9993636,0.00003990009,0.0003194594,0.000007706012,0.000001973758,0.000004497253,0.0001620391,0.000003241271,0.00009745611],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002522221,"threshold_uncertainty_score":0.005015075,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03388959530477474,"score_gpt":0.327941007350381,"score_spread":0.2940514120456062,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}