{"id":"W4414010667","doi":"10.1016/j.bpj.2025.09.004","title":"Structural dynamics of dengue virus UTRs and their cyclization","year":2025,"lang":"en","type":"article","venue":"Biophysical Journal","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta; University of Lethbridge","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Alberta Innovates; Canada Research Chairs; Canada Foundation for Innovation; Canadian Armed Forces; Rockingham County Arts Council","keywords":"Dengue virus; Dengue fever; Dynamics (music); Virology; Computational biology; Virus; Biology; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001616661,0.0002450183,0.0001981662,0.0002228545,0.0005935933,0.0005514654,0.0002917511,0.000259494,0.006073122],"category_scores_gemma":[0.0008003547,0.0002115329,0.0002932087,0.0002114821,0.0003582083,0.0007076329,0.0002699286,0.000731511,0.0007545556],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004956895,"about_ca_system_score_gemma":0.0002610061,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001439105,"about_ca_topic_score_gemma":0.001542087,"domain_scores_codex":[0.9998988,0.00001606933,0.000003492942,0.00003059898,0.00001358385,0.00003745281],"domain_scores_gemma":[0.9996941,0.00009234765,0.00006429014,0.00002586643,0.00004970781,0.00007371499],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002706109,0.0003193576,0.01975284,0.000226809,0.0001657986,0.001421348,0.001542665,0.02629765,0.9000847,0.02181367,0.00320734,0.02246181],"study_design_scores_gemma":[0.000131746,0.001532668,0.0901297,0.0001448121,0.0002300789,0.001581864,0.002650373,0.3340534,0.5269104,0.01585817,0.02645512,0.000321805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995979,0.0002920883,0.001472187,0.00009856659,0.000022247,0.000005662528,0.0001502053,0.00003915645,0.001940835],"genre_scores_gemma":[0.9982752,0.0001153649,0.0004531548,0.00004273714,0.000005094667,0.000005967077,0.0002840235,0.00001499564,0.0008034058],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006073122,"threshold_uncertainty_score":0.0203166,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005705613709241084,"score_gpt":0.2567573082594872,"score_spread":0.2510516945502461,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}