{"id":"W4414029924","doi":"10.5376/tgmb.2025.15.0014","title":"Functional Genomics of Root Development in &lt;i&gt;Populus&lt;/i&gt; and Its Ecological Implications","year":2025,"lang":"en","type":"article","venue":"Tree Genetics and Molecular Breeding","topic":"Bioenergy crop production and management","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Functional genomics; Genomics; Root (linguistics); Computational biology; Genetics; Gene; Genome; Philosophy; Linguistics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001420374,0.00009533783,0.000114944,0.00003709643,0.0001159235,0.00002643021,0.0000818486,0.00006717063,0.00002116328],"category_scores_gemma":[0.00001515438,0.00005152556,0.00002543033,0.000196371,0.00004258723,0.00001723344,0.0001766186,0.00004408421,0.000001010592],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002527036,"about_ca_system_score_gemma":0.00001296785,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003644682,"about_ca_topic_score_gemma":0.0005855477,"domain_scores_codex":[0.9992805,0.00001825576,0.000207897,0.0002654971,0.00007755595,0.0001503116],"domain_scores_gemma":[0.9997953,0.00001699955,0.0000481717,0.00003892363,0.00005019951,0.00005042092],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000007901403,0.00005926173,0.001888213,0.000009448422,0.00001822758,8.344775e-7,0.00002114244,0.00005897295,0.8916845,0.02290101,0.0001920922,0.0831584],"study_design_scores_gemma":[0.0002445311,0.00009211029,0.8627842,0.00001377665,0.00001942897,0.000003542287,0.0000349104,0.0002300326,0.04178504,0.0009538811,0.09369482,0.0001437426],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939417,0.001894638,0.0001936727,0.002389515,0.00007710967,0.0001455003,0.000003485648,0.00001294564,0.001341429],"genre_scores_gemma":[0.9984322,0.0003991302,0.0006251389,0.0001782519,0.00002822578,0.0000207096,0.00001817983,8.719528e-7,0.0002973373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.860896,"threshold_uncertainty_score":0.2101151,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02113588364200086,"score_gpt":0.2159854349997763,"score_spread":0.1948495513577755,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}