{"id":"W4414033125","doi":"10.1186/s12866-025-04170-6","title":"Influence of dietary components on the gut microbiota of middle-aged adults: the gut-Mediterranean connection","year":2025,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Libin Cardiovascular Institute of Alberta; Alberta Health Services; Alberta Cancer Foundation; University of Calgary","funders":"Health Canada; Bundesministerium für Bildung und Forschung; Canadian Institutes of Health Research; Alberta Cancer Foundation; Partenariat Canadien Contre Le Cancer; Natural Sciences and Engineering Research Council of Canada; Alberta Health Services","keywords":"Biology; Gut flora; Mediterranean diet; Mediterranean climate; Parasitology; Connection (principal bundle); Zoology; Ecology; Immunology; Internal medicine; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003688198,0.0002225489,0.000311823,0.00008031242,0.0001649094,0.000006327502,0.0005618123,0.0002799592,0.00002613653],"category_scores_gemma":[0.000138196,0.0001394854,0.0001624752,0.0001733893,0.0005537489,0.000002847311,0.0002037418,0.0002250402,0.00001397916],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002122429,"about_ca_system_score_gemma":0.0001345634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002296684,"about_ca_topic_score_gemma":0.0003539468,"domain_scores_codex":[0.9983469,0.0003935999,0.0005153933,0.0003931551,0.00003748299,0.0003134988],"domain_scores_gemma":[0.9986538,0.0001780488,0.000291988,0.0007018787,0.0001443058,0.00003001886],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005731219,0.0001294679,0.002757203,0.0001770139,0.00009156604,3.569259e-7,0.0001738182,0.0001889162,0.9897854,0.0001136243,0.005935064,0.00007442285],"study_design_scores_gemma":[0.002239794,0.000991103,0.2097943,0.0005519735,0.00008886569,0.00006244633,0.0005440477,0.00003412047,0.7633433,0.00006454958,0.02194191,0.0003435487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997112,0.0008093632,0.00004829925,0.0007233541,0.0003508012,0.0005499807,0.0002147528,0.000009265135,0.0001821444],"genre_scores_gemma":[0.9972307,0.000195352,0.0001028279,0.001714141,0.00007136966,0.00001668353,0.0003793875,0.00001367414,0.0002758507],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2264421,"threshold_uncertainty_score":0.5688048,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02478438613273904,"score_gpt":0.2555834015292672,"score_spread":0.2307990153965281,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}