{"id":"W4414037820","doi":"10.1101/2025.09.04.674336","title":"Stacked Waves and Qualitative Analysis of an Oncolytic Virus-Immune Model","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta; Universities Space Research Association","keywords":"Oncolytic virus; Immune system; Virology; Virus; Qualitative analysis; Biology; Qualitative research; Immunology; Sociology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004332148,0.0009065506,0.0004903881,0.001211365,0.0006130013,0.001473945,0.001130003,0.001928557,0.003319833],"category_scores_gemma":[0.001467051,0.0004367266,0.001056447,0.0004451537,0.001268288,0.001035391,0.001083943,0.0009314353,0.0004814617],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001515076,"about_ca_system_score_gemma":0.0007488179,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007766178,"about_ca_topic_score_gemma":0.001813145,"domain_scores_codex":[0.9997794,0.00006376942,0.000008330043,0.00002948568,0.00006875505,0.00005025005],"domain_scores_gemma":[0.9994711,0.0002214798,0.0001264529,0.00003001334,0.00009176227,0.00005929049],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00003689899,0.00006597325,0.0009586798,0.00007069087,0.00004132515,0.0003643186,0.0002199979,0.7656325,0.01624155,0.2126168,0.001038012,0.002713198],"study_design_scores_gemma":[0.000005423747,0.00001355786,0.0001221032,0.000005445203,0.000005584261,0.00002927649,0.00002898991,0.9851875,0.000547026,0.01361398,0.0004322665,0.000008792752],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3005707,0.0009269032,0.6389527,0.001930513,0.0001766297,0.000219318,0.0005090734,0.000399187,0.05631495],"genre_scores_gemma":[0.9463428,0.0005011526,0.0292023,0.0002399055,0.00005367476,0.0002123121,0.0002031827,0.0001052645,0.02313939],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.007766178,"threshold_uncertainty_score":0.01544195,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02582799057259251,"score_gpt":0.3290607159265282,"score_spread":0.3032327253539358,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}