{"id":"W4414218061","doi":"10.3389/fmicb.2025.1641976","title":"Novel M23 peptidases Pgp4, Pgp5, and Pgp6 contribute to helical cell shape in Campylobacter jejuni","year":2025,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; UK Research and Innovation","keywords":"Peptidoglycan; Periplasmic space; Cleavage (geology); Cleave; Mutant; Glycan; Peptide; Peptide sequence; Signal peptide; Cell wall","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001266319,0.0005188104,0.0001902237,0.0001807178,0.0002046848,0.0003107133,0.0002159404,0.0003511785,0.0009226767],"category_scores_gemma":[0.0001918139,0.0001555119,0.0003125699,0.00022663,0.0002550891,0.0002236696,0.0003415231,0.000446148,0.0004458329],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003478339,"about_ca_system_score_gemma":0.0002503622,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001279432,"about_ca_topic_score_gemma":0.0008865432,"domain_scores_codex":[0.999885,0.0000142608,0.00001076809,0.00002197075,0.00003384762,0.00003420111],"domain_scores_gemma":[0.9998926,0.00001020593,0.00002870554,0.000009336323,0.00001413051,0.00004499117],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001508798,0.0000222597,0.001187977,0.00004268768,0.000003907665,0.000261995,0.00003388816,0.0001091232,0.9960002,0.00007982367,0.00007176663,0.00203545],"study_design_scores_gemma":[0.00002575273,0.0003473493,0.04563615,0.00001520778,0.00003353635,0.0015975,0.0002302946,0.001885514,0.9421665,0.0001371619,0.007905208,0.00001972008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967657,0.0006922237,0.001147281,0.00007749695,0.00001765369,0.00001635062,0.0002521164,0.0000356251,0.0009954637],"genre_scores_gemma":[0.991488,0.0004190505,0.003624037,0.0000833831,0.000009820485,0.00002355107,0.001132669,0.0000250576,0.003194474],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001279432,"threshold_uncertainty_score":0.003086686,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005176808333846194,"score_gpt":0.2434506687478853,"score_spread":0.2382738604140391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}