{"id":"W4414329967","doi":"10.1128/jvi.01098-25","title":"MERS-CoV and SARS-CoV-2 infection in diverse human lung organoid-derived cultures","year":2025,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Infection Control and Ventilation","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University of Waterloo; University of British Columbia; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation","keywords":"Organoid; Immune system; Lung; Cell; Respiratory system; Cell culture; Coronavirus disease 2019 (COVID-19); Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002243485,0.00007092378,0.0002415386,0.0003429812,0.00006496249,0.000009506731,0.00002170294,0.00009915956,0.00002430373],"category_scores_gemma":[0.00008869555,0.00005684512,0.00006390979,0.0001242772,0.00004728492,0.0001078403,0.00001811651,0.0002555246,0.000002379988],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006658259,"about_ca_system_score_gemma":0.00003612975,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001199852,"about_ca_topic_score_gemma":0.0002741832,"domain_scores_codex":[0.9993966,0.00007012396,0.000288014,0.00007937945,0.00006914423,0.0000967489],"domain_scores_gemma":[0.9996272,0.00002560041,0.0001693156,0.00005009045,0.0001104842,0.00001735972],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002684656,0.0000793513,0.2751646,0.00002339595,0.00007272822,0.00003066304,0.0001559441,0.00001125176,0.7225355,0.0002362233,0.0009071197,0.0005147732],"study_design_scores_gemma":[0.004021762,0.0003960304,0.8954896,0.00005723731,0.0001907868,0.0002118272,0.00003904403,0.0004039351,0.09558395,0.0004310371,0.003120105,0.00005469143],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955161,0.0001773264,0.001899902,0.0008909437,0.0003865433,0.00009236339,3.405508e-7,0.0000087073,0.001027814],"genre_scores_gemma":[0.9984202,0.00009286111,0.00004177051,0.001197623,0.0001435166,0.000001278947,0.000001314598,0.000003867253,0.00009757551],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6269516,"threshold_uncertainty_score":0.2318077,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01668735430319618,"score_gpt":0.3415583726672133,"score_spread":0.3248710183640172,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}