{"id":"W4414367781","doi":"10.1093/gbe/evaf172","title":"Recurrent Evolutionary Innovations in Rodent and Primate <i>Schlafen</i> Genes","year":2025,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Fondation pour la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Human evolutionary genetics; Natural selection; Subfunctionalization; Gene; Molecular evolution; Convergent evolution; Selection (genetic algorithm); Hominidae; Sexual selection; Biological evolution","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001583445,0.0001006492,0.000106375,0.00009096711,0.0001134976,0.00000986066,0.00006068316,0.0001424919,0.000002658724],"category_scores_gemma":[0.00002382197,0.00009368061,0.00001824906,0.0001447613,0.00007329683,0.000007643498,0.0001461033,0.00006859332,0.000001840336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002628222,"about_ca_system_score_gemma":0.00005286864,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002449437,"about_ca_topic_score_gemma":0.00003424612,"domain_scores_codex":[0.9993684,0.00003053746,0.0002192007,0.0001991933,0.00002113885,0.0001615275],"domain_scores_gemma":[0.9997506,0.000005855593,0.00004871162,0.0001310883,0.0000437116,0.00002001599],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002860936,0.0001625637,0.5380307,0.0001775271,0.0001230651,5.015779e-7,0.000148765,0.0001122134,0.3898078,0.04943233,0.0009118615,0.02080661],"study_design_scores_gemma":[0.0008326973,0.0002092168,0.9506501,0.00002336539,0.00001807515,0.00001853606,0.0001843582,0.0009021118,0.001435803,0.004320369,0.04119099,0.0002143713],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9697886,0.02630884,0.002534818,0.0003345472,0.0001395755,0.0001736735,0.00001902066,0.000008331442,0.0006925763],"genre_scores_gemma":[0.996164,0.002505389,0.0006944227,0.0001196811,0.00004437795,0.00003283077,0.000277961,0.000003756029,0.0001575289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4126194,"threshold_uncertainty_score":0.3820184,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008401228622539612,"score_gpt":0.2476518641892211,"score_spread":0.2392506355666815,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}