{"id":"W4414422659","doi":"10.1002/cphc.202500595","title":"Propagation of Photoinduced Electric Field Changes Through Phytochrome and their Impact on Conformational Transitions","year":2025,"lang":"en","type":"article","venue":"ChemPhysChem","topic":"Light effects on plants","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"European Synchrotron Radiation Facility; Deutsche Forschungsgemeinschaft","keywords":"Electric field; Chromophore; Photoisomerization; Field (mathematics); Nitrile; Protein structure","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005540181,0.00009912021,0.000132808,0.00001372994,0.00006633997,0.00001558471,0.00006889467,0.0000648459,0.00006517906],"category_scores_gemma":[0.00002066851,0.00003331631,0.00004464026,0.0002579776,0.0000137839,0.00009558068,0.000009919761,0.00006308324,0.000003378625],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001516064,"about_ca_system_score_gemma":0.00001174362,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002382512,"about_ca_topic_score_gemma":0.000008144887,"domain_scores_codex":[0.9995918,0.00001574743,0.0000936182,0.0001138191,0.00007262096,0.0001123698],"domain_scores_gemma":[0.9996458,0.0002086607,0.00004992888,0.00003361873,0.00004031335,0.00002170625],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003737971,0.00004508306,0.00006593494,0.00002269285,0.00001849259,1.312124e-7,0.0001272404,5.314117e-7,0.9895393,0.0003475082,0.0003712357,0.009424451],"study_design_scores_gemma":[0.0001382081,0.0002666445,0.01490723,0.00004807044,0.000005140266,0.0000018588,0.00005652517,0.0001687863,0.9836861,0.0004037316,0.0002510147,0.00006667957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949254,0.00005792802,0.00001268633,0.00145809,0.0000237507,0.0002269912,0.00003790426,0.00002698718,0.003230311],"genre_scores_gemma":[0.9994076,0.00001897063,0.0000110215,0.000400971,0.0000426123,0.00002391038,0.00005935814,3.994391e-7,0.00003517721],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01484129,"threshold_uncertainty_score":0.13586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01385128960675175,"score_gpt":0.2396317049956562,"score_spread":0.2257804153889045,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}