{"id":"W4414892378","doi":"10.1128/mbio.02521-25","title":"Separation of <i>Pseudomonas aeruginosa</i> type IV pilus-dependent twitching motility and surface-sensing responses","year":2025,"lang":"en","type":"article","venue":"mBio","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; University of Toronto; McMaster University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Canada Foundation for Innovation; Ontario Research Foundation","keywords":"Pilin; Pilus; Motility; Complementation; Mutant; Protein subunit; Biofilm; Bacterial adhesin","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009165585,0.00008211908,0.00009870302,0.00001614612,0.00004688655,0.00001462369,0.00004722379,0.0001033025,0.000003270627],"category_scores_gemma":[0.00007777518,0.00007443013,0.0000248564,0.00006866531,0.00004770198,0.000002953417,0.00006677653,0.00005175073,7.054538e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007304889,"about_ca_system_score_gemma":0.00002686046,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002689169,"about_ca_topic_score_gemma":0.000009851978,"domain_scores_codex":[0.999464,0.00004479527,0.0001474942,0.0001956429,0.00005925123,0.00008878265],"domain_scores_gemma":[0.9996992,0.00001271308,0.00005032833,0.000139615,0.00007349082,0.00002468239],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001857671,0.000008323057,0.008015563,0.00002636305,0.0000135996,3.784429e-7,0.00002761583,0.000006762853,0.9900669,0.00002750537,0.00005830766,0.001562864],"study_design_scores_gemma":[0.0001909358,0.00004996558,0.02940656,0.00001620691,0.00001136303,0.00000295897,0.00001527512,0.0001910897,0.9692786,0.0001835676,0.0005869564,0.00006649776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998432,0.0003177331,0.0005384377,0.0001692623,0.0001205364,0.00008144712,0.0000122485,0.000008612646,0.0003197117],"genre_scores_gemma":[0.9988317,0.00003876306,0.000419481,0.0001281281,0.0000316092,3.037049e-7,0.00006346135,0.000004194845,0.0004823381],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.021391,"threshold_uncertainty_score":0.3035173,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009494678250613293,"score_gpt":0.2693480518408816,"score_spread":0.2598533735902683,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}