{"id":"W4414929216","doi":"10.14529/jsfi250201","title":"Bacterial Mini Microtubule as a Minimal Model System for Exploring Dynamic Instability Using Molecular Dynamics Simulations","year":2025,"lang":"en","type":"article","venue":"Supercomputing Frontiers and Innovations","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Russian Science Foundation; Centre de Recherches Mathématiques; Lomonosov Moscow State University; Northwestern University","keywords":"Microtubule; Context (archaeology); Computational model; Scale (ratio); Dynamics (music); Molecular dynamics; Stability (learning theory)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001353653,0.0001690356,0.0002007383,0.0001324428,0.0006014571,0.0001157707,0.0001255058,0.00008275792,0.00002285841],"category_scores_gemma":[0.00004940246,0.0001899803,0.00007118741,0.000454951,0.0001240481,0.0004089109,0.0001745446,0.0001217419,0.000001877736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000711576,"about_ca_system_score_gemma":0.00007735814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003596419,"about_ca_topic_score_gemma":0.000109782,"domain_scores_codex":[0.9988619,0.00002552794,0.0003980798,0.0003761279,0.0000647202,0.0002736174],"domain_scores_gemma":[0.9995898,0.00003516099,0.00006688073,0.0002044626,0.00005888976,0.00004481308],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00004599726,0.0001177979,0.002733157,0.00009660798,0.0000692812,0.000001164933,0.0007446326,0.05120082,0.933677,0.003959687,0.0002625755,0.007091262],"study_design_scores_gemma":[0.0004026792,0.00002490821,0.00235917,0.00006958856,0.00005148978,0.000006508616,0.0009908042,0.9920726,0.002396986,0.0004043915,0.001019363,0.0002015384],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6700629,0.00001494474,0.3283541,0.0001874714,0.0005598869,0.0003106204,0.0001282227,0.00004449626,0.0003374041],"genre_scores_gemma":[0.9056112,0.000001534338,0.09395169,0.00009310334,0.00002107525,0.00002567504,0.0001309761,0.00001702402,0.0001477004],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9408718,"threshold_uncertainty_score":0.774717,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01704510106305963,"score_gpt":0.2590432252987123,"score_spread":0.2419981242356527,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}