{"id":"W4414985606","doi":"10.1128/jb.00359-25","title":"Compositional analysis of bacterial peptidoglycan: insights from peptidoglycomics into structure and function","year":2025,"lang":"en","type":"review","venue":"Journal of Bacteriology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"IONICS Mass Spectrometry (Canada); University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Peptidoglycan; Function (biology); Component (thermodynamics); Cell wall; Bacterial protein; Bacterial cell structure; Protein structure; Structural integrity; Cell function","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007182731,0.001056165,0.001236277,0.002517405,0.0002363327,0.001092522,0.0008095839,0.001200003,0.002123598],"category_scores_gemma":[0.000861739,0.000429471,0.0005443471,0.002138028,0.0006171992,0.0015719,0.0008184013,0.001788611,0.002267877],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008288042,"about_ca_system_score_gemma":0.001045764,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008733594,"about_ca_topic_score_gemma":0.0009776955,"domain_scores_codex":[0.9997504,0.000031263,0.00002480083,0.00004845508,0.0001194109,0.00002564487],"domain_scores_gemma":[0.9996494,0.0001386137,0.000042606,0.000015731,0.0001134735,0.00004009764],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009147067,0.00007418344,0.0002112342,0.0190421,0.0001134993,0.0001906951,0.00007467641,0.0007191985,0.01310197,0.008478167,0.01766887,0.9402339],"study_design_scores_gemma":[0.00001057582,0.0001071429,0.0009065997,0.002099388,0.0001003905,0.0007551216,0.00005382634,0.0001923434,0.0040592,0.002298517,0.9893878,0.0000291953],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002568163,0.9979007,0.0004059111,0.0002113478,0.0002223047,0.000004756872,0.00002346207,0.00001235714,0.0009622431],"genre_scores_gemma":[0.0009730598,0.9975386,0.0004989322,0.0001619018,0.0001120677,0.000006433535,0.00004498634,0.000003212995,0.0006608432],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002517405,"threshold_uncertainty_score":0.007104158,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007999279800681516,"score_gpt":0.2520547661953918,"score_spread":0.2440554863947103,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}