{"id":"W4415234644","doi":"10.1093/molbev/msaf266","title":"Accumulation of a Biparentally Inherited Neptune Transposable Element in Natural Killifish Hybrids ( <i>Fundulus diaphanus</i> × <i>F. heteroclitus</i> )","year":2025,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Moncton","funders":"Uppsala Multidisciplinary Center for Advanced Computational Science; Natural Sciences and Engineering Research Council of Canada; Mitacs; Vetenskapsrådet; New Brunswick Innovation Foundation","keywords":"Transposable element; Hybrid; Piwi-interacting RNA; Reproductive isolation; Sympatric speciation; Chromosome; Introgression; Wader; Killifish","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007232086,0.0002134151,0.0001231635,0.0005892439,0.0001800218,0.0001585741,0.0001613815,0.0002692188,0.00110839],"category_scores_gemma":[0.0001191718,0.0001055589,0.0001413538,0.0001735986,0.0002148752,0.0001030215,0.0002381468,0.0003743416,0.0001628283],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002319419,"about_ca_system_score_gemma":0.00008594097,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001255468,"about_ca_topic_score_gemma":0.002313419,"domain_scores_codex":[0.9998783,0.00000988124,0.000008399305,0.00005743859,0.00002449933,0.00002142961],"domain_scores_gemma":[0.9997552,0.00005700307,0.00006962781,0.00001850091,0.00002114564,0.00007865088],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002405777,0.000004871531,0.0009170759,0.000006324758,0.000003589391,0.00002799472,0.00001955997,0.000005459994,0.9986078,0.000009630502,0.000002720284,0.0003709957],"study_design_scores_gemma":[0.000007770636,0.0003964399,0.3628691,0.000006377491,0.0000529247,0.001061654,0.0001952971,0.0003837734,0.6337449,0.00005723944,0.001208944,0.00001549181],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987324,0.0001448604,0.0004106728,0.000009970643,0.000002988766,0.000005030705,0.0002140778,0.00001651337,0.0004635832],"genre_scores_gemma":[0.9972156,0.00006486437,0.0004733801,0.00002163803,0.000002645856,0.00001181598,0.0006376816,0.00001319275,0.001559218],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001255468,"threshold_uncertainty_score":0.003707886,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01191235235432758,"score_gpt":0.2648025191942344,"score_spread":0.2528901668399068,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}