{"id":"W4415308275","doi":"10.1101/2025.10.17.683135","title":"Direct Genome Transfer from <i>Acholeplasma laidlawii</i> to Yeast","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Genome; Yeast; Cloning (programming); Gene; Saccharomyces cerevisiae; Cloning vector; Multiplex","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002504868,0.0005885176,0.0002698429,0.0004434908,0.0001969304,0.0005276874,0.0003898329,0.0003132459,0.01383499],"category_scores_gemma":[0.000356574,0.0002138931,0.0004128131,0.0005704513,0.000186722,0.0002923741,0.0004664877,0.001148967,0.005173385],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003196333,"about_ca_system_score_gemma":0.0002340126,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000930216,"about_ca_topic_score_gemma":0.0009525715,"domain_scores_codex":[0.9998572,0.00001429101,0.000007761549,0.00004211328,0.00005398373,0.00002463277],"domain_scores_gemma":[0.9998926,0.00002751412,0.00002160275,0.00002225723,0.00001588806,0.00002022725],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001985093,0.00004009403,0.0005045686,0.0005271153,0.00003357171,0.0003415714,0.00007426576,0.000309938,0.9759036,0.001765969,0.005830997,0.01446974],"study_design_scores_gemma":[0.00004332234,0.000140473,0.002642782,0.00006954096,0.00002607423,0.0002731789,0.00009812442,0.000979458,0.9434034,0.0008500533,0.05145627,0.00001731467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6540104,0.008228756,0.1557778,0.003879018,0.002529399,0.0006402632,0.1002796,0.01362339,0.06103137],"genre_scores_gemma":[0.812646,0.006946734,0.0805084,0.0005308029,0.0001112405,0.0002229056,0.05830923,0.002403453,0.03832118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01383499,"threshold_uncertainty_score":0.04628265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01398838735185614,"score_gpt":0.1961887663858405,"score_spread":0.1822003790339843,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}