{"id":"W4415427118","doi":"10.1093/gbe/evaf170","title":"The Genome Sequence of the Hemlock Woolly Adelgid, <i>Adelges tsugae</i> Annand 1924","year":2025,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre; SickKids Foundation; University of Toronto; Agriculture and Agri-Food Canada; University of British Columbia; Hospital for Sick Children; Canada's Michael Smith Genome Sciences Centre","funders":"Biotechnology and Biological Sciences Research Council; European Research Executive Agency; European Commission; Medical Research Council; European Molecular Biology Laboratory; National Science Foundation of Sri Lanka; Genome Canada; Utah Agricultural Experiment Station; Agriculture and Agri-Food Canada; Wellcome Trust; Utah State University","keywords":"Synteny; Genome; Contig; Hemiptera; Sequence assembly; Aphid; Acyrthosiphon pisum; Whole genome sequencing","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002034231,0.00009050085,0.0001162847,0.000008250039,0.0006613372,0.00002112606,0.0002208825,0.000110825,0.00002790395],"category_scores_gemma":[0.00003252781,0.00002658041,0.00006794116,0.0002087293,0.0002081969,0.00004204339,0.00007240949,0.0001208283,0.000007422879],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002791298,"about_ca_system_score_gemma":0.00002061324,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003380628,"about_ca_topic_score_gemma":0.0005680101,"domain_scores_codex":[0.9992914,0.0001107687,0.0001788573,0.000174781,0.0000432936,0.0002008673],"domain_scores_gemma":[0.9995841,0.0001720502,0.00008594389,0.00007385753,0.00006284792,0.00002117107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008950047,0.00001693286,0.01448542,0.000004496369,0.00003447179,2.187919e-7,0.00003738052,0.000007627674,0.9649399,0.01088507,0.0002651095,0.009233882],"study_design_scores_gemma":[0.0001574991,0.00018223,0.6946495,0.00001750393,0.00002915829,0.0000211346,0.0002589273,0.00007711302,0.0007576059,0.007669726,0.296056,0.0001235947],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882589,0.005158879,0.00003167966,0.004149016,0.0004747223,0.0001930663,0.0001738112,0.00001756184,0.001542362],"genre_scores_gemma":[0.9972649,0.0005162346,0.000006127409,0.0002757494,0.0001082374,0.00001953485,0.00002937809,3.597815e-7,0.001779486],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9641823,"threshold_uncertainty_score":0.5086538,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0091806117487253,"score_gpt":0.2168427578772164,"score_spread":0.207662146128491,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}