{"id":"W4415461881","doi":"10.1002/csc2.70177","title":"De novo transcriptome assembly and candidate gene discovery for high seedling vigor in cicer milkvetch ( <i>Astragalus cicer</i> L.)","year":2025,"lang":"en","type":"article","venue":"Crop Science","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saskatchewan Ministry of Agriculture; University of Saskatchewan","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Seedling; Germination; Candidate gene; Transcriptome; Gene; Population; Genetic variation","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003250479,0.000351171,0.0006119591,0.0004710837,0.0005149313,0.0005538093,0.0002240236,0.0002648025,0.0005928399],"category_scores_gemma":[0.0002805063,0.000241915,0.000689723,0.0005372848,0.0001866654,0.0001914775,0.0004066803,0.0006100362,0.0003087608],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003900892,"about_ca_system_score_gemma":0.0005940722,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003437455,"about_ca_topic_score_gemma":0.006413945,"domain_scores_codex":[0.9998499,0.000009548547,0.000007381761,0.00006799129,0.00003279834,0.0000323009],"domain_scores_gemma":[0.9997962,0.00004892602,0.00004075077,0.00002040579,0.00005955775,0.00003412051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001892643,0.00002355699,0.00791317,0.000134028,0.00003685472,0.0001878749,0.0001394753,0.0006853357,0.9858315,0.00008816631,0.000223784,0.004546969],"study_design_scores_gemma":[0.00009172453,0.0006000136,0.711477,0.00008022191,0.000403572,0.0008273655,0.0008537804,0.03412973,0.2372347,0.0004843554,0.01374162,0.00007606566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.982386,0.0007179215,0.009746298,0.00006176467,0.00003229435,0.00006488963,0.006244407,0.0001813824,0.0005649225],"genre_scores_gemma":[0.9330135,0.0006179378,0.02920407,0.0001807888,0.00002927335,0.0001960394,0.03263827,0.000188074,0.003932014],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003437455,"threshold_uncertainty_score":0.006834924,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007246278273404388,"score_gpt":0.2654027352968393,"score_spread":0.2581564570234349,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}