{"id":"W4415583827","doi":"10.1128/spectrum.01707-25","title":"High-throughput screening reveals diverse lambdoid prophage inducers","year":2025,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Prophage; Bacteria; Inducer; Genome; DNA Transposable Elements; Bacterial genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004592831,0.0007236417,0.0008186326,0.0008524127,0.0002620981,0.0007168931,0.0003852414,0.0005095106,0.001468635],"category_scores_gemma":[0.0004649743,0.0002125833,0.0006087106,0.0007552498,0.0001811877,0.0003486197,0.000429643,0.0007171435,0.0007994472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002430038,"about_ca_system_score_gemma":0.0003259394,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000500614,"about_ca_topic_score_gemma":0.001142807,"domain_scores_codex":[0.999585,0.00005316739,0.00002738139,0.00007617607,0.0002143637,0.00004393681],"domain_scores_gemma":[0.9997163,0.0001001489,0.00004358312,0.0000250707,0.00006961932,0.00004515004],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003517506,0.0004607229,0.001910662,0.0005362586,0.00008951197,0.0002643342,0.00004279189,0.001140288,0.97442,0.0001075256,0.0006180241,0.0200582],"study_design_scores_gemma":[0.0001581689,0.005772576,0.01705379,0.0001009577,0.0003058345,0.0009956402,0.0001625109,0.004896326,0.9591701,0.0002004465,0.01111779,0.00006593994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9636095,0.01172082,0.009544005,0.0006146681,0.00007195377,0.0005183026,0.00645002,0.0009945366,0.006476278],"genre_scores_gemma":[0.9643024,0.009385992,0.01134465,0.0003311668,0.00003292119,0.0002442957,0.008677231,0.0001151687,0.005566256],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001468635,"threshold_uncertainty_score":0.004913032,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007680746864669566,"score_gpt":0.232844111623746,"score_spread":0.2251633647590764,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}