{"id":"W4415656478","doi":"10.1038/s41467-025-64379-x","title":"A memory transcriptome time course reveals essential long-term memory transcription factors","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Transcriptome; Transcription factor; Drosophila melanogaster; Transcription (linguistics); Gene; Transcriptional activity; Memory consolidation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001938065,0.0001719563,0.0001582263,0.00008213447,0.0002965908,0.00002083392,0.0006450416,0.0005951181,0.00004811571],"category_scores_gemma":[0.00003132766,0.0001686263,0.0001334165,0.0001985031,0.0002118267,0.00001064366,0.0001061028,0.0003619326,0.00002044398],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002776999,"about_ca_system_score_gemma":0.0001266328,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003699884,"about_ca_topic_score_gemma":0.0001435101,"domain_scores_codex":[0.9990231,0.0001823131,0.0002461547,0.0002776755,0.00008956346,0.0001812391],"domain_scores_gemma":[0.9987541,0.00002786715,0.00006900341,0.0009936781,0.0001048584,0.00005043995],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005548776,0.0001618633,0.00969866,0.00001974493,0.0001631583,4.176501e-7,0.0001071215,0.00000465421,0.9818746,0.0002242847,0.004969034,0.002720919],"study_design_scores_gemma":[0.0009142595,0.00006713314,0.5909418,0.00006615779,0.0001623925,0.0000104727,0.00009049032,0.000024492,0.3972859,0.0001937431,0.009866643,0.0003764709],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.979162,0.01259859,0.0005370668,0.002158434,0.0004623173,0.000394649,0.00005738485,0.00005171838,0.004577824],"genre_scores_gemma":[0.9891359,0.0005899634,0.0005689063,0.0004961338,0.00005173827,0.00003840173,0.002857027,0.00001313002,0.006248828],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5845887,"threshold_uncertainty_score":0.687638,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008488091200139138,"score_gpt":0.290882373481419,"score_spread":0.2823942822812798,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}