{"id":"W4415928266","doi":"10.1099/acmi.0.001138.v1","title":"Genome sequences of distinct genotypes of bacterial pathogen Xanthomonas euvesicatoria pv. euvesicatoria from pepper (Capsicum annuum L.) in Serbia","year":2025,"lang":"","type":"article","venue":"","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; UK Research and Innovation; Wellcome Trust; Innovation Fund of the Republic of Serbia","keywords":"Genome; Plasmid; Virulence; Whole genome sequencing; Gene; Xanthomonas; Effector; Pathogen","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009118724,0.0008615853,0.002029106,0.0001409901,0.0002749863,0.0001126049,0.001569151,0.0006489953,0.002829134],"category_scores_gemma":[0.0003724591,0.0004437086,0.0004925057,0.001528439,0.0009206981,0.0003875261,0.0009507578,0.0003822568,0.00005348264],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001457674,"about_ca_system_score_gemma":0.0002812316,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00374527,"about_ca_topic_score_gemma":0.004766353,"domain_scores_codex":[0.9938747,0.0007328159,0.002285473,0.001458581,0.0006223841,0.001026063],"domain_scores_gemma":[0.9968469,0.001095528,0.001018171,0.0004558201,0.0003590089,0.0002246223],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005328498,0.0005146716,0.0697858,0.0001175729,0.0002637113,0.00002244338,0.0007279798,0.000001753994,0.9246656,0.001062994,0.0002696267,0.002035045],"study_design_scores_gemma":[0.0007317808,0.0004057951,0.8790082,0.0003130411,0.0002564757,0.00000317509,0.00115737,0.00001348133,0.1056735,0.001864514,0.009838993,0.0007337137],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9793325,0.004609288,0.000005759784,0.001014879,0.003270407,0.0008129256,0.008475491,0.00005771482,0.002421056],"genre_scores_gemma":[0.9959448,0.001145066,0.0004610253,0.00005805256,0.0009804385,0.00004702384,0.0006770557,0.000007995666,0.0006785663],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8189921,"threshold_uncertainty_score":0.9998015,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01185320094754185,"score_gpt":0.2224683856076957,"score_spread":0.2106151846601539,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}