{"id":"W4416177367","doi":"10.1525/sla.2025.9.4.540","title":"Discovery and Dilemma","year":2025,"lang":"en","type":"article","venue":"Studies in Late Antiquity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Plague (disease); Dilemma; Suspect; Excavation; Yersinia pestis; Harm","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000223946,0.0001050279,0.0001651867,0.00006048334,0.00007640187,0.000027714,0.0001141834,0.00007262907,0.000002473324],"category_scores_gemma":[0.0002403629,0.00009423566,0.00003147169,0.0001357296,0.0002860936,0.000008174211,0.0005619587,0.00009907019,0.000002982711],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001897788,"about_ca_system_score_gemma":0.00003596798,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002738616,"about_ca_topic_score_gemma":0.000210224,"domain_scores_codex":[0.9992172,0.00005825682,0.0001355944,0.0002912713,0.00006561563,0.0002320202],"domain_scores_gemma":[0.9996564,0.00003440952,0.00002204159,0.0002150498,0.00005257724,0.0000195532],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002910923,0.000103948,0.3868628,0.0002750457,0.0002985905,0.00003783886,0.0003196961,0.00001892473,0.6023914,0.0007680368,0.004789133,0.003843484],"study_design_scores_gemma":[0.001577965,0.0003275074,0.7212572,0.0002015042,0.00003502546,0.000008486407,0.0004790216,0.00006527185,0.2328622,0.001360113,0.04135823,0.0004674848],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993391,0.003100018,0.00003209211,0.0003683367,0.0001706565,0.0001249204,0.00001271262,0.000006652019,0.002793574],"genre_scores_gemma":[0.9928066,0.00446046,0.00007492975,0.0001550016,0.00004483421,0.00001164691,0.00001411122,0.000005871181,0.002426579],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3695291,"threshold_uncertainty_score":0.3842818,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02832012480597112,"score_gpt":0.3782287187421502,"score_spread":0.3499085939361791,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}