{"id":"W4416264302","doi":"10.48130/bpr-0025-0027","title":"Evolutionary dynamics and functional characterization of Jasmonate ZIM-domain (&lt;i&gt;JAZ&lt;/i&gt;) genes across &lt;i&gt;Camellia sinensis&lt;/i&gt; pan-genome","year":2025,"lang":"en","type":"article","venue":"Beverage Plant Research","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Gene; Gene family; Evolutionary dynamics; Genome; Phylogenetic tree; Abiotic component; Gene expression; Selection (genetic algorithm); Phylogenetics; Adaptation (eye)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003066591,0.0001974437,0.0003041983,0.001109497,0.0002730583,0.0003928677,0.0002012322,0.0002850118,0.0006980494],"category_scores_gemma":[0.0004358551,0.0001146107,0.0004151851,0.0009253729,0.0001742929,0.000296789,0.0004606243,0.0003091505,0.0003040585],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002914628,"about_ca_system_score_gemma":0.0001619514,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009012209,"about_ca_topic_score_gemma":0.001453452,"domain_scores_codex":[0.9997668,0.00002138967,0.00002444558,0.0001193494,0.0000352374,0.00003278094],"domain_scores_gemma":[0.9995452,0.00008438127,0.0001630279,0.00005448573,0.00008529511,0.00006765968],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004334248,0.00003470159,0.06972393,0.0002416351,0.0001067645,0.000314625,0.0005407721,0.0003509648,0.9093123,0.000307091,0.0002676729,0.01836613],"study_design_scores_gemma":[0.00002055234,0.0001338365,0.965313,0.00002554507,0.0001416948,0.001087065,0.0002480993,0.001564362,0.02280215,0.0001629583,0.008475616,0.00002513612],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958055,0.0008149025,0.000790467,0.00003973328,0.000005764232,0.000007525795,0.001959605,0.00002951702,0.0005470065],"genre_scores_gemma":[0.9915138,0.000355118,0.001766316,0.0000967825,0.000009708844,0.00001883208,0.005642195,0.00003533082,0.0005618737],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001109497,"threshold_uncertainty_score":0.00233525,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01399195176773481,"score_gpt":0.2587450592234922,"score_spread":0.2447531074557573,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}