{"id":"W4416343922","doi":"10.1016/j.placenta.2025.08.112","title":"Optimizing CUT&amp;tag to study histone modifications in the human placenta","year":2025,"lang":"en","type":"article","venue":"Placenta","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Human placenta; Histone; Placenta; Fetal membrane; Histone H3","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003691258,0.000113282,0.00009735984,0.00008675393,0.0001722742,0.00003979514,0.0003000984,0.00006173265,0.00002172372],"category_scores_gemma":[0.00006393556,0.00009893111,0.00003795747,0.0002124289,0.00002189666,0.00000238208,0.0001103929,0.00009296898,0.00001773218],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003948209,"about_ca_system_score_gemma":0.00003069129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001308982,"about_ca_topic_score_gemma":0.0009929544,"domain_scores_codex":[0.9990472,0.0001329439,0.0002175131,0.0003037132,0.0001198859,0.0001788105],"domain_scores_gemma":[0.9993603,0.0000245711,0.00004173815,0.0004993893,0.0000360844,0.00003796589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009663287,0.001413082,0.0530213,0.00001624193,0.00008149513,0.000002988857,0.003708908,0.003590201,0.9288828,0.0009295542,0.006130211,0.002126636],"study_design_scores_gemma":[0.005364892,0.0007954985,0.2112179,0.00007525333,0.0001924726,0.00000311892,0.009277342,0.0004300199,0.3932887,0.0009368954,0.3773688,0.001049075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897279,0.000497008,0.003254516,0.0005737431,0.0001184988,0.0006110326,0.000009588798,0.000008845586,0.005198915],"genre_scores_gemma":[0.9970737,0.00004492881,0.0007903595,0.0003129885,0.00004909583,0.00009247737,0.0001101552,0.00001015124,0.001516197],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.535594,"threshold_uncertainty_score":0.4034294,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03510458451556651,"score_gpt":0.357240752656336,"score_spread":0.3221361681407695,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}