{"id":"W4416425759","doi":"10.1111/febs.70340","title":"Plant‐produced encapsulin displays non‐typhoidal <i>Salmonella enterica</i> antigens and assembles into mosaic nanoparticles","year":2025,"lang":"en","type":"article","venue":"FEBS Journal","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada","keywords":"Tobacco mosaic virus; Epitope; Salmonella enterica; Salmonella; Nicotiana benthamiana; Fusion protein; Antigen; Plant virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001441599,0.0001352425,0.0001377162,0.00004179447,0.0002495647,0.00007496164,0.000173446,0.00008436639,0.000009547802],"category_scores_gemma":[0.00001931732,0.0001154094,0.00005980249,0.00008623683,0.00006223831,0.000006470869,0.00006012161,0.0001336445,0.000007144379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008387596,"about_ca_system_score_gemma":0.00007745142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001737161,"about_ca_topic_score_gemma":0.00003243285,"domain_scores_codex":[0.9991674,0.00003129973,0.0002300597,0.0002577965,0.00008807344,0.0002253516],"domain_scores_gemma":[0.99959,0.00001194268,0.00006848669,0.0001831103,0.00003869047,0.0001077951],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005988633,0.00006299307,0.008204562,0.00001270185,0.00005907122,0.000007727945,0.00005592287,0.00001703082,0.980765,0.0000544399,0.008840931,0.001859669],"study_design_scores_gemma":[0.000626384,0.00009425116,0.01611204,0.00003961714,0.0000421235,0.0002322366,0.00008857022,0.00008494828,0.9354368,0.0002863698,0.04678334,0.0001733459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953671,0.001531135,0.001833793,0.0006501294,0.00015116,0.00009718087,0.0000688415,0.00000885823,0.0002918341],"genre_scores_gemma":[0.9968315,0.001576649,0.0007024668,0.0002668636,0.0001754953,0.000009187056,0.00006856559,0.00001049096,0.0003588215],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0453283,"threshold_uncertainty_score":0.4706258,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005828813633820381,"score_gpt":0.2449825288875497,"score_spread":0.2391537152537294,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}