{"id":"W4416441027","doi":"10.1101/2025.11.20.689491","title":"Description of <i>Gopheromyces tardescens</i> , gen. nov., sp.nov., <i>Gigasporangiomyces pilosus,</i> gen. nov., sp.nov., <i>Kelyphomyces adhaerens,</i> gen. nov., sp. nov., proposal of <i>Testudinimycetales</i> ord. nov. and <i>Testudinimycetaceae</i> fam. nov., and emended description of the order <i>Neocallimastigales</i>","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Innovation, Science and Economic Development Canada","keywords":"Phylogenetic tree; Sporangium; Phylum; Phylogenetics; Genus; Ribosomal RNA; Clade","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002068354,0.000749159,0.0003379841,0.001251401,0.0006052615,0.0008187442,0.0003681407,0.0003944209,0.002625473],"category_scores_gemma":[0.0005103431,0.0001582845,0.0004171605,0.001513225,0.0003272653,0.0005472662,0.0006280332,0.000593896,0.001620922],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003294933,"about_ca_system_score_gemma":0.0006983728,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00337583,"about_ca_topic_score_gemma":0.003438981,"domain_scores_codex":[0.9996587,0.00002517026,0.0000706603,0.0001147691,0.00008130274,0.00004937477],"domain_scores_gemma":[0.9995172,0.00004725447,0.000141518,0.00008601269,0.0001293903,0.00007852777],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006897885,0.0002887385,0.07847361,0.001712328,0.0001433418,0.004002624,0.0007562263,0.001110953,0.7098771,0.0009395041,0.007794533,0.1942113],"study_design_scores_gemma":[0.00007731716,0.0009841387,0.4702807,0.0007084538,0.0003305967,0.01528181,0.001651054,0.001925673,0.1214305,0.0004880117,0.3867441,0.00009759638],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8911353,0.0139575,0.01218259,0.001393412,0.0008912529,0.00111675,0.03774605,0.000476596,0.04110049],"genre_scores_gemma":[0.8696089,0.01082555,0.03250002,0.0007204069,0.0003581078,0.0005578187,0.0744034,0.0001341229,0.01089172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00337583,"threshold_uncertainty_score":0.008783042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01435550058950872,"score_gpt":0.2079080214047686,"score_spread":0.1935525208152599,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}