{"id":"W4416508536","doi":"10.1172/jci.insight.198074","title":"Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis","year":2025,"lang":"en","type":"article","venue":"JCI Insight","topic":"Autoimmune and Inflammatory Disorders Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Japan Society for the Promotion of Science; Mochida Memorial Foundation for Medical and Pharmaceutical Research; Uehara Memorial Foundation","keywords":"Colocalization; Synovitis; Transcriptome; Crosstalk; Arthritis; Rheumatoid arthritis; Immune system; Stromal cell; Inflammation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003942378,0.0002069227,0.0006367821,0.0001504031,0.0002148129,0.00003661312,0.0002402025,0.0001460749,0.00009472036],"category_scores_gemma":[0.0001463458,0.0001327283,0.0001537011,0.0003986454,0.0003544269,0.0001428106,0.00006821529,0.000473255,0.00001602763],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007037121,"about_ca_system_score_gemma":0.000607795,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002487127,"about_ca_topic_score_gemma":0.0001111631,"domain_scores_codex":[0.9979907,0.0001079251,0.0008127071,0.0002663985,0.0005091747,0.0003130583],"domain_scores_gemma":[0.9987381,0.00004389602,0.000223564,0.0006067699,0.0003267693,0.00006087492],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01277211,0.004013855,0.7868456,0.002841423,0.001502627,0.0002744963,0.01427397,0.000102172,0.1103856,0.01084059,0.004363273,0.05178421],"study_design_scores_gemma":[0.01259443,0.002170279,0.9210387,0.001937596,0.0001852973,0.00001438132,0.0008150892,0.0002808222,0.03801766,0.0003999655,0.02215646,0.0003893378],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885437,0.003720821,0.0004046655,0.000710931,0.0002491388,0.0008573826,0.00003412329,0.00004440244,0.005434816],"genre_scores_gemma":[0.9977565,0.0000987054,0.00007036025,0.000239237,0.00003859894,0.00005409867,0.00004640263,0.0000284265,0.001667667],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.134193,"threshold_uncertainty_score":0.5412502,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008370504884521799,"score_gpt":0.2422844020384925,"score_spread":0.2339138971539707,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}