{"id":"W4416657763","doi":"10.5256/f1000research.10919.r20278","title":"Referee report. For: The Dockstore: enabling modular, community-focused sharing of Docker-based genomics tools and workflows [version 1; referees: 2 approved]","year":2017,"lang":"en","type":"article","venue":"Faculty of 1000 Research Ltd","topic":"Scientific Computing and Data Management","field":"Decision Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Genome Canada; Canadian Institutes of Health Research; University of California, Santa Cruz","keywords":"Workflow; Genomics; Work (physics); Troubleshooting; Context (archaeology); Data sharing","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","sts","scholarly_communication"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.04804123,0.0001727476,0.0004214972,0.0004349957,0.003077484,0.001563578,0.005300547,0.0001066444,0.00004978464],"category_scores_gemma":[0.02964231,0.0001131442,0.0001686062,0.0004675532,0.0008338609,0.0004813247,0.003733843,0.000626462,0.00001924098],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000112999,"about_ca_system_score_gemma":0.0001749182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001716208,"about_ca_topic_score_gemma":0.000587226,"domain_scores_codex":[0.9943154,0.0005498615,0.0009520183,0.0007932765,0.002855813,0.0005336115],"domain_scores_gemma":[0.9857684,0.005065773,0.0007808282,0.005927249,0.00230156,0.0001561695],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001393301,0.0007230983,0.02560765,0.000490487,0.0003057446,0.00004683325,0.004353063,0.007227222,0.01933505,0.00527822,0.2421207,0.6931186],"study_design_scores_gemma":[0.00197069,0.0003098981,0.03143264,0.0003643568,0.00003608351,0.000005815948,0.00554766,0.07091145,0.006740837,0.01207537,0.8702815,0.0003237056],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9689612,0.0001973857,0.01538667,0.007976426,0.0004083613,0.001149995,0.0007517008,0.00003973737,0.005128492],"genre_scores_gemma":[0.9825788,0.00002699274,0.006326203,0.00002471614,0.00007197148,0.00002587697,0.0002361615,0.00001772455,0.01069159],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6927949,"threshold_uncertainty_score":0.9994729,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.3639870346292814,"score_gpt":0.4595066027808552,"score_spread":0.09551956815157375,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}