{"id":"W4416797650","doi":"10.1099/mgen.0.001572","title":"Global emergence of Acinetobacter baumannii International Clone 12 predominantly found in the Middle East","year":2025,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; Hôpital Charles-Le Moyne; Centre intégré de santé et de services sociaux de Chaudière-Appalaches; Centre Intégré de Santé et de Services Sociaux des Laurentides; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"Umeå Universitet; Fonds de Recherche du Québec - Santé; Vetenskapsrådet; Medicinska fakulteten, Umeå Universitet; Canadian Institute for Advanced Research","keywords":"Middle East; Acinetobacter baumannii; clone (Java method); Whole genome sequencing; Genome; Multilocus sequence typing; Antibiotic resistance; Plasmid; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001607129,0.0001225092,0.0001338073,0.0000295723,0.00003492158,0.00002670804,0.0005425256,0.0001084247,0.00003044646],"category_scores_gemma":[0.00004114613,0.0001064517,0.00006927788,0.0001137407,0.0001186643,0.000004471807,0.0001674027,0.00005409816,0.000005367789],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003699925,"about_ca_system_score_gemma":0.0001041901,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000568011,"about_ca_topic_score_gemma":0.0006180661,"domain_scores_codex":[0.9991592,0.00004440685,0.0003088738,0.0002503617,0.00006034647,0.0001767789],"domain_scores_gemma":[0.9994875,0.000006183415,0.00009672149,0.0003239993,0.00006986827,0.00001572532],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003823494,0.000116993,0.03985684,0.00003501565,0.00006739439,0.000003127157,0.0002175022,0.000113044,0.9501794,0.0003997101,0.00812073,0.0005079204],"study_design_scores_gemma":[0.003909171,0.0003081238,0.5734255,0.0002837364,0.0001116701,0.00007628218,0.002463552,0.0001674555,0.1418747,0.0005585522,0.2760034,0.0008178893],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943728,0.0002513398,0.001031632,0.0001865807,0.0006800519,0.0001865342,0.0001020389,0.000002679403,0.003186321],"genre_scores_gemma":[0.9976063,0.0001086941,0.0009926236,0.0002403147,0.000155202,0.000003110288,0.0001019691,0.000007260809,0.000784523],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8083047,"threshold_uncertainty_score":0.4340973,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01601729018753794,"score_gpt":0.2486781127748003,"score_spread":0.2326608225872624,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}