{"id":"W4416817613","doi":"10.1016/j.theriogenology.2025.117775","title":"Transcriptome profiling of granulosa cells during follicular development identifies RMDN2 polymorphisms associated with reproductive traits in chickens","year":2025,"lang":"en","type":"article","venue":"Theriogenology","topic":"Hypothalamic control of reproductive hormones","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"Key Technologies Research and Development Program; National Key Research and Development Program of China; China Academy of Railway Sciences; Agriculture Research System of China","keywords":"Transcriptome; Follicular phase; Gene; RNA-Seq; Gene expression profiling; Gene expression; Follicle","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004901731,0.0002649133,0.0008105762,0.0004958058,0.00007363883,0.000006542256,0.0001582408,0.0001686706,0.00002943912],"category_scores_gemma":[0.0001804466,0.0002257414,0.0001002474,0.0005897483,0.0002827647,0.00007249082,0.00004206942,0.000272578,0.000006363385],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000188288,"about_ca_system_score_gemma":0.0002967849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005870577,"about_ca_topic_score_gemma":0.000142021,"domain_scores_codex":[0.9979082,0.000146809,0.0005649657,0.0007115174,0.0002286927,0.0004397861],"domain_scores_gemma":[0.9990735,0.00005286706,0.000189515,0.000442095,0.000198678,0.00004336585],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000924603,0.000300797,0.02217545,0.0000827042,0.0007951924,0.0001094695,0.00456518,0.00002699795,0.9699711,0.0001930027,0.000001977626,0.0008535194],"study_design_scores_gemma":[0.002373668,0.000123495,0.3893318,0.0001613542,0.0001279979,0.00003366713,0.0005195851,0.000003767826,0.6070012,0.0001621409,0.00002992976,0.0001313284],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947633,0.002330209,0.0002111405,0.0008860932,0.0001509749,0.001066667,0.000008439129,0.00008627775,0.0004969209],"genre_scores_gemma":[0.9975778,0.00003427088,0.001098404,0.00004085008,0.00003785147,0.0000867453,0.00001450991,0.00003393627,0.001075661],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3671564,"threshold_uncertainty_score":0.9205467,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01182866104072184,"score_gpt":0.2321111952079527,"score_spread":0.2202825341672309,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}