{"id":"W4416858593","doi":"10.3390/biology14121706","title":"Comparative Genomic and Microenvironmental Profiles of Hereditary and Sporadic TNBC in Colombian Women","year":2025,"lang":"en","type":"article","venue":"Biology","topic":"BRCA gene mutations in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"National Cancer Institute; Georgia Institute of Technology","keywords":"Immune system; Germline; Cancer; Gene; Breast cancer; Tumor microenvironment; Disease; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008851284,0.0001963524,0.0001927056,0.0008795568,0.0003167547,0.0003657101,0.0001008929,0.0001743467,0.001495069],"category_scores_gemma":[0.0004366379,0.0001058062,0.0001047272,0.000586219,0.0001808354,0.00005179931,0.0002337653,0.0001218811,0.0001366247],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004880627,"about_ca_system_score_gemma":0.0001895389,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03243718,"about_ca_topic_score_gemma":0.04182725,"domain_scores_codex":[0.9998912,0.00001858449,0.000006112651,0.00004216534,0.00001577176,0.00002632002],"domain_scores_gemma":[0.9998842,0.00002622246,0.00003831922,0.0000102389,0.00001757584,0.000023537],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000512902,0.00003092084,0.9788707,0.00006608239,0.00006421371,0.0004900651,0.0004724822,0.0001014595,0.009623318,0.00007030645,0.00034434,0.00935319],"study_design_scores_gemma":[0.0000031094,0.00002226994,0.9987544,0.000005043619,0.00001334512,0.0003248152,0.0002600733,0.00007895508,0.0001440611,0.00001187581,0.0003800597,0.000002078353],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998166,0.0004944362,0.00006935873,0.0000319193,0.000002948535,0.000006950974,0.0006698302,0.000003321766,0.0005552536],"genre_scores_gemma":[0.9989801,0.000193177,0.00007982165,0.00001787097,0.000002702599,0.00000694595,0.0004957963,0.000002289633,0.0002211444],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03243718,"threshold_uncertainty_score":0.06449676,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007555462127433329,"score_gpt":0.261068553048134,"score_spread":0.2535130909207006,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}