{"id":"W4417001059","doi":"10.33584/rps.18.2025.3763","title":"CRISPR-Cas9 gene insertion in Epichloë species","year":2025,"lang":"","type":"article","venue":"NZGA Research and Practice Series","topic":"Plant and fungal interactions","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Concordia University","keywords":"Gene; Insert (composites); Insertion; Secondary metabolite; Reporter gene; CRISPR; Coding region","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002704136,0.0002201068,0.0002831638,0.0001972362,0.001087226,0.0008878692,0.0003022511,0.0002594185,0.0008839154],"category_scores_gemma":[0.004624345,0.0001151585,0.00005962074,0.001672188,0.0005816395,0.002408667,0.0003399271,0.001216992,0.0001529816],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001022577,"about_ca_system_score_gemma":0.0001101629,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004330616,"about_ca_topic_score_gemma":0.01340499,"domain_scores_codex":[0.996539,0.001186468,0.0004276957,0.0005530811,0.0004958991,0.0007978774],"domain_scores_gemma":[0.9934484,0.005589414,0.00009743856,0.0001238612,0.0005590057,0.0001819017],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.01398153,0.003083891,0.0275558,0.0002492286,0.0002285981,0.0003831034,0.002551101,0.000003468104,0.7536995,0.06174777,0.05614113,0.08037488],"study_design_scores_gemma":[0.0004076497,0.001027056,0.1487377,0.0002009001,0.00002485517,0.0001210194,0.01941887,0.00003987737,0.01116705,0.005766357,0.8128302,0.0002584534],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.69411,0.008337332,0.000009935778,0.151667,0.0009165099,0.0007181031,0.0001615443,0.00004265279,0.1440369],"genre_scores_gemma":[0.9094478,0.0338478,0.0001465998,0.0005274065,0.0004093478,0.00005155623,0.00005981151,0.000001927902,0.05550779],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7566891,"threshold_uncertainty_score":0.9678254,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1718349208589232,"score_gpt":0.4168904949003623,"score_spread":0.2450555740414391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}