{"id":"W4417015494","doi":"10.5376/lgg.2025.16.0005","title":"Key Loci Identified by GWAS for Agronomic Traits in Soybean","year":2025,"lang":"","type":"article","venue":"Legume Genomics and Genetics","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Genome-wide association study; Genomics; Genetic association; Selection (genetic algorithm); Key (lock); Genomic selection; Quantitative trait locus; Association mapping","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007993284,0.0005117962,0.0005699587,0.0006567426,0.0003096758,0.0005474297,0.0001775375,0.0003536177,0.001790567],"category_scores_gemma":[0.0007218785,0.0001939848,0.0009148158,0.001430013,0.0001819414,0.0001675692,0.0002897459,0.0004305932,0.0002070843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001676027,"about_ca_system_score_gemma":0.0002739368,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002202475,"about_ca_topic_score_gemma":0.00472088,"domain_scores_codex":[0.9995434,0.00008677418,0.00005719037,0.0001997176,0.00007361515,0.00003929471],"domain_scores_gemma":[0.9995031,0.0001971173,0.0001638659,0.00003137401,0.00004340961,0.00006111109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002680099,0.00006937321,0.7688479,0.0007001734,0.003891277,0.00190429,0.0003784531,0.00110895,0.1831369,0.0006313543,0.001280189,0.03537097],"study_design_scores_gemma":[0.000061733,0.0001339556,0.9926751,0.00003750031,0.001251707,0.0005719836,0.00009574671,0.0009961596,0.001859197,0.0003432293,0.001956422,0.00001733198],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9854541,0.004982052,0.004052735,0.0003116383,0.00008777624,0.00002392393,0.003217785,0.0001332511,0.0017368],"genre_scores_gemma":[0.993986,0.00101607,0.002554423,0.0001610441,0.00002882095,0.00001867494,0.001757755,0.00003929421,0.0004379548],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002202475,"threshold_uncertainty_score":0.005989969,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01308804848434364,"score_gpt":0.2269419409683863,"score_spread":0.2138538924840427,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}