{"id":"W4417050034","doi":"10.1038/s41467-025-66992-2","title":"LANA-specific CD4+ effector T cells accumulate at the site of KSHV infection in humanized mice","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Functional Genomics Center Zurich; Swiss Vaccine Research Institute; Schweizerische Multiple Sklerose Gesellschaft; Schweizerische Akademie der Medizinischen Wissenschaften; National Science Foundation; Krebsliga Schweiz; Eidgenössische Technische Hochschule Zürich; Staatssekretariat für Bildung, Forschung und Innovation; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Roman, Marga und Mareille Sobek Stiftung; Universität Zürich; Pfizer","keywords":"Immunosurveillance; Effector; Immune system; Antigen; T cell; In vivo; In vitro; Humanized mouse","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003476181,0.0008593914,0.0004071444,0.0010293,0.0002239162,0.0005633502,0.000315148,0.0007788723,0.002851459],"category_scores_gemma":[0.0001556889,0.0004265149,0.0003714968,0.0002384969,0.0004463094,0.0004252142,0.0003040272,0.001544318,0.000966845],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003900496,"about_ca_system_score_gemma":0.0002024427,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004865141,"about_ca_topic_score_gemma":0.0003859274,"domain_scores_codex":[0.9995669,0.000069052,0.00003221006,0.0001377877,0.00007293943,0.0001212237],"domain_scores_gemma":[0.9997604,0.00005460854,0.00005381567,0.00005040658,0.00001815568,0.00006259252],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004826314,0.0002045122,0.0001301204,0.00002672161,0.000007640939,0.00006833024,0.00003925044,0.00007746746,0.9977537,0.00006911974,0.00007260064,0.001067984],"study_design_scores_gemma":[0.0001093155,0.002560416,0.003105321,0.0000147069,0.00003196241,0.0007474722,0.00005505859,0.001249094,0.9890164,0.0001000901,0.002999463,0.00001082098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9900153,0.001533814,0.003163391,0.0001705419,0.00006096317,0.0001018942,0.001429721,0.0006005742,0.002923695],"genre_scores_gemma":[0.9885148,0.0007223529,0.002644696,0.0001193169,0.00002972475,0.0001028346,0.001757801,0.00009039651,0.006018084],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002851459,"threshold_uncertainty_score":0.009539068,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01771613140989996,"score_gpt":0.3243718691254193,"score_spread":0.3066557377155193,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}