{"id":"W4417230777","doi":"10.1093/molbev/msaf322","title":"Genomic architecture and evolution of heterostyly: new insights from <i>Cordia subcordata</i> (Boraginaceae)","year":2025,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Key Research and Development Program of China; Guangzhou University; National Natural Science Foundation of China","keywords":"Gene duplication; Gene; Supergene (geology); Heterostyly; Genome; Transcriptome; Gibberellin; Gene family","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009754155,0.0002011254,0.0002592336,0.0001194622,0.000076964,0.000007166781,0.0001354976,0.0003631007,0.000001938293],"category_scores_gemma":[0.00009400001,0.0001878649,0.0000510854,0.0001149572,0.0003569659,0.000005144092,0.000230007,0.0001338419,0.000001959169],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003654201,"about_ca_system_score_gemma":0.0001257036,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005844845,"about_ca_topic_score_gemma":0.0001617765,"domain_scores_codex":[0.9986712,0.0002156114,0.0002125077,0.0006587695,0.00003357087,0.0002083812],"domain_scores_gemma":[0.9993929,0.00001764037,0.00009922646,0.0003700276,0.0000555152,0.00006474008],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001749864,0.00002144568,0.08059761,0.00001339258,0.0001185072,0.000001388796,0.0000161173,0.00001686929,0.9130777,0.004629446,0.000217467,0.001115078],"study_design_scores_gemma":[0.001494838,0.0006534753,0.6328744,0.00003009471,0.0002182569,0.00004872501,0.00005314922,0.00004850737,0.2967321,0.05472279,0.0126686,0.0004550853],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8666562,0.02473246,0.1076807,0.0002529369,0.0001823361,0.0001899984,0.00009250562,0.00001340927,0.0001994569],"genre_scores_gemma":[0.9975088,0.0002427677,0.001334389,0.0001621221,0.00009607954,0.000009019464,0.0005205094,0.000009779231,0.0001165675],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6163456,"threshold_uncertainty_score":0.7660909,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002973218323305852,"score_gpt":0.2167039207664046,"score_spread":0.2137307024430987,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}