{"id":"W4417261560","doi":"10.64898/2025.12.10.693613","title":"Neotropical bats as bioindicators for emerging zoonoses in Central America: A case study identifying <i>Trypanosoma cruzi</i> in bats from Belize using metagenomic next-generation sequencing","year":2025,"lang":"","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Metagenomics; Microorganism; Bioindicator; Disease reservoir; Human pathogen; Human health; Pathogen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000716245,0.000609772,0.0003129981,0.001375204,0.002388572,0.0008804859,0.0007230396,0.0007665568,0.0007642203],"category_scores_gemma":[0.0007022357,0.0004443884,0.0003168016,0.0008342854,0.001648186,0.0005884537,0.0009889435,0.0005656813,0.00007995233],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002193506,"about_ca_system_score_gemma":0.001228669,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1631668,"about_ca_topic_score_gemma":0.3195147,"domain_scores_codex":[0.999556,0.0001018604,0.00002409311,0.0001063778,0.00005447795,0.0001571783],"domain_scores_gemma":[0.9994683,0.0001137579,0.0001496178,0.0000341181,0.0001031899,0.0001310136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005806674,0.0001380892,0.96348,0.00008437879,0.0000474119,0.01766324,0.009823525,0.000199384,0.004333952,0.0001931302,0.0002970252,0.003681848],"study_design_scores_gemma":[0.000005715597,0.0002272842,0.9626088,0.00008967135,0.0000687032,0.009912858,0.02433143,0.0008622355,0.0005708219,0.0001131715,0.001188616,0.00002076929],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989679,0.0001795025,0.0001622453,0.0001246309,0.000006111889,0.00002474801,0.00005582493,0.000004351522,0.000474788],"genre_scores_gemma":[0.9992461,0.0001607795,0.0002894586,0.00009612487,0.000005563532,0.000006683105,0.00005377491,0.000001506243,0.0001400839],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1631668,"threshold_uncertainty_score":0.3244342,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09958131860697864,"score_gpt":0.3301973788360775,"score_spread":0.2306160602290989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}