{"id":"W4417267132","doi":"10.3390/biology14121776","title":"Repetitive DNA Dynamics, Phylogenetic Relationships and Divergence Times in Andean Ctenomys (Rodentia: Ctenomyidae)","year":2025,"lang":"en","type":"article","venue":"Biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Universidad de Los Lagos; Universidad Austral de Chile","keywords":"Phylogenetic tree; Repeated sequence; Clade; Chromosome; Phylogenetics; Divergence (linguistics); Karyotype; Satellite DNA; Fluorescence in situ hybridization","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001312877,0.00009116447,0.0001270818,0.00002499983,0.0001725474,0.00001765802,0.0001177853,0.0001175422,0.0002116207],"category_scores_gemma":[0.00009459257,0.00004174843,0.00002790273,0.0002739316,0.0001041896,0.00002463058,0.0001136765,0.00009620819,0.0000177856],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000260872,"about_ca_system_score_gemma":0.00001154913,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003361193,"about_ca_topic_score_gemma":0.006070433,"domain_scores_codex":[0.9992034,0.0001301063,0.0001734605,0.0002921291,0.00003081875,0.0001700867],"domain_scores_gemma":[0.9996367,0.0001950961,0.00004194407,0.0000495925,0.00004039979,0.00003623728],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000008067669,0.00004109339,0.9262145,0.00000287301,0.0000123372,0.0000017073,0.00005062201,0.000002408881,0.02464866,0.03164266,0.00004132255,0.01733379],"study_design_scores_gemma":[0.0001121226,0.0000653816,0.9758484,0.00001139557,0.00001003228,0.000002732955,0.0001424132,0.0002603777,0.0002221749,0.02026471,0.002968451,0.00009175692],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921017,0.0005635261,0.00003433574,0.002287953,0.0001240851,0.0001519229,0.00005859172,0.00002307388,0.004654774],"genre_scores_gemma":[0.9985362,0.0001485202,0.0001227753,0.00009446745,0.00004799322,0.00001672794,0.0001063045,4.058907e-7,0.0009265976],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04963399,"threshold_uncertainty_score":0.3387444,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01233707498439132,"score_gpt":0.2161036644741308,"score_spread":0.2037665894897395,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}