{"id":"W4417318400","doi":"10.3390/microorganisms13122843","title":"Unveiling Acinetobacter endophylla sp. nov.: A Specialist Endophyte from Peganum harmala with Distinct Genomic and Metabolic Traits","year":2025,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Espace pour la vie","funders":"Université Mohammed VI Polytechnique","keywords":"Genome; Secondary metabolite; Gene; Endophyte; Secondary metabolism; Comparative genomics; Phenotype; Bacteria; Transcriptome; Metabolomics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001945629,0.000631986,0.0003962313,0.0006122026,0.0003386829,0.0006232799,0.0002851738,0.0006304495,0.0001975375],"category_scores_gemma":[0.0003425523,0.000217737,0.0003392318,0.0007064217,0.0002351139,0.0005645458,0.0007211867,0.000415258,0.0003048515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001300631,"about_ca_system_score_gemma":0.0002715776,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001311268,"about_ca_topic_score_gemma":0.001505667,"domain_scores_codex":[0.9997519,0.00002359669,0.00004750027,0.0000876329,0.00005061651,0.00003870383],"domain_scores_gemma":[0.9997175,0.00005040864,0.00008346469,0.00003802708,0.00005673458,0.00005391615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001569911,0.000108835,0.01973049,0.0002000456,0.00002803476,0.001413574,0.0005609535,0.00007526339,0.9678512,0.00004289148,0.00007441726,0.009757257],"study_design_scores_gemma":[0.0001086248,0.002037868,0.7055743,0.0001652444,0.0008177771,0.03146147,0.006028524,0.002799486,0.233732,0.0004742048,0.0167002,0.0001001719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975947,0.0005071101,0.0007067197,0.0001460676,0.00001452175,0.00004125513,0.0005797632,0.00001286422,0.0003969854],"genre_scores_gemma":[0.9912191,0.0007208448,0.004968472,0.0001804014,0.00003773112,0.00003884484,0.002329051,0.00001344158,0.0004921533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001311268,"threshold_uncertainty_score":0.002607226,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007050857306754061,"score_gpt":0.2114417658422584,"score_spread":0.2043909085355043,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}