{"id":"W4417414719","doi":"10.64898/2025.12.16.694558","title":"MPXV Clade IIb virus infection in mice leads to prolonged viral replication, macrophage infiltration, and decreased spermatogenesis in the testes","year":2025,"lang":"","type":"article","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; University of Alberta; University of Calgary; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Monkeypox; Virus; Clade; Viral shedding; Sex organ; Transmission (telecommunications); Pathogenesis; Sexual transmission","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000229217,0.0005816039,0.0002836366,0.0007477818,0.0002874526,0.0004281897,0.0002603098,0.0007087448,0.00321803],"category_scores_gemma":[0.000115426,0.0003742585,0.0004854449,0.0001737378,0.000354,0.0003017224,0.0002083776,0.001540754,0.0007043076],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002990855,"about_ca_system_score_gemma":0.0002063148,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008086486,"about_ca_topic_score_gemma":0.0007515402,"domain_scores_codex":[0.9996798,0.00005023546,0.0000287922,0.00008674225,0.00005535189,0.00009911747],"domain_scores_gemma":[0.9997023,0.00002646962,0.0000938212,0.00002489611,0.00002377648,0.0001287049],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004800081,0.000225848,0.001006647,0.00008131328,0.00001392994,0.0001251984,0.00007383303,0.00007764792,0.9963768,0.0001147315,0.0001719664,0.001252142],"study_design_scores_gemma":[0.000187437,0.008180059,0.03819313,0.0001056389,0.00007436867,0.001376372,0.0004053907,0.002519268,0.9421889,0.0003183276,0.006420437,0.0000306851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991277,0.002250881,0.001842851,0.0002740526,0.0001217083,0.00007519734,0.001710487,0.000197955,0.002249807],"genre_scores_gemma":[0.9846134,0.001379706,0.001590275,0.0002250814,0.00003756706,0.0001690739,0.001394384,0.00004849439,0.01054201],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00321803,"threshold_uncertainty_score":0.01076537,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01031449193898576,"score_gpt":0.2499352133000878,"score_spread":0.239620721361102,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}