{"id":"W4417462116","doi":"10.1097/olq.0000000000002285","title":"Commentary on Methodological Rigor in “Prevalence, Treatment, and Follow-Up for Lymphogranuloma Venereum Serovars of Chlamydia trachomatis Among Gay, Bisexual, and Other Men Who Have Sex With Men Attending Sexually Transmitted Infection Clinics in Alberta, Canada, 2018 to 2022”","year":2025,"lang":"en","type":"article","venue":"Sexually Transmitted Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"","keywords":"Lymphogranuloma venereum; Chlamydia trachomatis; Men who have sex with men; Serotype; Sexually transmitted disease; Male Homosexuality; Chlamydia; Chlamydia trachomatis infection","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000641825,0.0004865295,0.0009054171,0.0007623009,0.0002234668,0.00003427126,0.0001930545,0.0002924294,0.00006725647],"category_scores_gemma":[0.0002073531,0.0004086571,0.00008147544,0.0006668143,0.0004293453,0.000185074,0.00003278284,0.0003031509,0.00000110359],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003242666,"about_ca_system_score_gemma":0.0004038553,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.3003642,"about_ca_topic_score_gemma":0.5062892,"domain_scores_codex":[0.9964725,0.0009754314,0.000742755,0.001042209,0.0001285488,0.0006385467],"domain_scores_gemma":[0.9967365,0.002461832,0.0001463596,0.000442332,0.00008880913,0.0001241582],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004582292,0.001261715,0.9533103,0.0004747231,0.0009400462,0.00001273337,0.001687453,0.0001910503,0.006566112,0.00007924899,0.002868629,0.02802568],"study_design_scores_gemma":[0.009862783,0.001955453,0.9787843,0.0002591633,0.0003495706,0.00001152158,0.001474704,0.000271399,0.003711141,0.0001303897,0.00274952,0.0004400095],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936577,0.000916135,0.0006328277,0.0008797434,0.0001143566,0.002440516,0.0008637416,0.00003964697,0.0004553307],"genre_scores_gemma":[0.9944763,0.0003645281,0.0002077403,0.000567594,0.00002714522,0.0007852338,0.0001992809,0.00005257663,0.003319584],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.205925,"threshold_uncertainty_score":0.9998365,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03707080715721732,"score_gpt":0.341879575823784,"score_spread":0.3048087686665667,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}