{"id":"W4417520399","doi":"10.1016/j.sste.2025.100780","title":"Individual level modeling of infectious disease transmission with reinfection dynamics: Application to Tuberculosis in Manitoba, Canada","year":2025,"lang":"en","type":"article","venue":"Spatial and Spatio-temporal Epidemiology","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Winnipeg; University of Manitoba; Manitoba Health","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Infectious disease (medical specialty); Tuberculosis; Public health; Disease; Psychological intervention; Transmission (telecommunications); Disease transmission; Public health interventions; Maximization","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001379727,0.0002579945,0.0008458813,0.0002013826,0.0001378449,0.000004769074,0.0001274316,0.0001604608,0.000007869787],"category_scores_gemma":[0.003351958,0.0001988739,0.00006266381,0.0003619722,0.00008738082,0.00005855496,0.0001079001,0.000237923,5.662351e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004027488,"about_ca_system_score_gemma":0.0002699149,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.859769,"about_ca_topic_score_gemma":0.9645742,"domain_scores_codex":[0.9974893,0.0005309704,0.0009643343,0.0005333174,0.0001446424,0.0003374043],"domain_scores_gemma":[0.9969858,0.002238365,0.000255456,0.0002407747,0.0001210235,0.0001586158],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0003100303,0.00008215271,0.931106,0.0002862691,0.0000612572,0.000002791875,0.00008005533,0.0327504,0.000007339686,0.01058408,0.0002164053,0.02451322],"study_design_scores_gemma":[0.0006213734,0.0001987554,0.4118347,0.0001807926,0.00009297256,0.000001266226,0.00008117562,0.4705755,0.0000116968,0.1159081,0.0002416008,0.0002521138],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.504661,0.00009819051,0.4905444,0.003942193,0.00005264867,0.0005482775,0.00004377403,0.00003163083,0.00007790505],"genre_scores_gemma":[0.9948246,0.00006710448,0.003686486,0.001024845,0.00003862652,0.0002141383,0.0001141465,0.00001310918,0.00001693965],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5192713,"threshold_uncertainty_score":0.8109843,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1074232638294043,"score_gpt":0.3438083146490954,"score_spread":0.2363850508196912,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}