{"id":"W5581280","doi":"10.4315/0362-028x-73.3.452","title":"Probiotics Down-Regulate Genes in Serovar Typhimurium Pathogenicity Islands 1 and 2","year":2010,"lang":"en","type":"article","venue":"Journal of Food Protection","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Pathogenicity island; Biology; Microbiology; Salmonella; Virulence; Gene; Genomic island; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005824923,0.00007804667,0.0001670052,0.00002388881,0.00005622963,0.00001994453,0.00007949297,0.0001488651,0.00002950636],"category_scores_gemma":[0.00006889159,0.00002941876,0.00005660691,0.0001440832,0.00003139371,0.00009799143,0.00002125269,0.000316556,0.000001659447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009525377,"about_ca_system_score_gemma":0.000006944314,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002618663,"about_ca_topic_score_gemma":0.0005836757,"domain_scores_codex":[0.9993164,0.00009222606,0.0002770897,0.0001048607,0.0000764539,0.0001329697],"domain_scores_gemma":[0.9995861,0.00004260571,0.0002147097,0.00002731062,0.00007616057,0.00005309523],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009489055,0.00003752815,0.01736779,0.00000532419,0.000009285562,0.000002736464,0.00004100462,0.00000479084,0.9272394,0.00002427304,0.00001568175,0.05515736],"study_design_scores_gemma":[0.0003605622,0.002306018,0.9379975,0.00002234055,0.00001740052,0.0005919805,0.00007444739,0.0001109275,0.04973001,0.004621704,0.004019977,0.0001471404],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983979,0.0001559799,0.00001874374,0.0008149733,0.0004297184,0.0001339289,0.000003536527,0.000008183744,0.00003700901],"genre_scores_gemma":[0.9992809,0.00006216889,0.0001539287,0.0000517318,0.0004287963,0.000002495022,0.000001123726,6.239653e-7,0.00001828688],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9206297,"threshold_uncertainty_score":0.1375296,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01835676510739257,"score_gpt":0.2092280930762552,"score_spread":0.1908713279688626,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}