{"id":"W6887898910","doi":"10.17863/cam.50462","title":"Transcriptome-wide association study of breast cancer risk by estrogen-receptor status.","year":2020,"lang":"en","type":"article","venue":"Apollo (University of Cambridge)","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Medical Research and Materiel Command; NIH Office of the Director; Servicio Gallego de Salud; Instituto de Salud Carlos III; Cancer Council Western Australia; Cancer Council NSW; Cancer Council Victoria; World Cancer Research Fund; Medical Research Council; Hellenic Health Foundation; Freistaat Sachsen; Institut Català de la Salut; Centro de Investigación Biomédica en Red de Cáncer; Biomedical Research Council; Federal Agency for Scientific Organizations; Mutuelle Générale de l'Education Nationale; Institut Gustave-Roussy; Ministero dello Sviluppo Economico; Radboud Universitair Medisch Centrum; National Health and Medical Research Council; Ministry of Education, Science and Technology; Academia Sinica; Deutsche Krebshilfe; Cancer Institute NSW; Medizinischen Hochschule Hannover; Cancer Council South Australia; Centre International de Recherche sur le Cancer; Kreftforeningen; Institut National Du Cancer; Oak Foundation; Leids Universitair Medisch Centrum; Karolinska Institutet; Associazione Italiana per la Ricerca sul Cancro; KWF Kankerbestrijding; Vetenskapsrådet; Fondation de France; Stavros Niarchos Foundation; University of Westminster; Ligue Contre le Cancer; Korea Health Industry Development Institute; Hungarian Scientific Research Fund; Ministerio de Economía y Competitividad; Erasmus Medisch Centrum; Japan Agency for Medical Research and Development; Deutsche Gesetzliche Unfallversicherung; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; King's College London; Fondation ARC pour la Recherche sur le Cancer; Gentofte Hospital; California Breast Cancer Research Program; Generalitat de Catalunya; Alexander von Humboldt-Stiftung; Cancerfonden; American Cancer Society; Cancer Australia; Radboud Universiteit; Russian Foundation for Basic Research; Kuopion Yliopistollinen Sairaala; National Medical Research Council; Norges Forskningsråd; Stockholms Läns Landsting; Universiteit Maastricht; Vrije Universiteit Amsterdam; Academy of Finland; Maastricht Universitair Medisch Centrum; National Heart, Lung, and Blood Institute; Ohio State University; Universiteit Leiden; University of Crete; Institut National de la Santé et de la Recherche Médicale; Agency for Science, Technology and Research; Canadian Institutes of Health Research; European Commission; Avon Foundation for Women; Breast Cancer Research Trust; Fondation du cancer du sein du Québec; National Cancer Institute; European Regional Development Fund; Ministerio de Sanidad, Servicios Sociales e Igualdad; University of Cambridge; Nemzeti Kutatási Fejlesztési és Innovációs Hivatal; Virginia Department of Health; Government of Canada; Georgetown University; Breast Cancer Campaign; National Research Foundation; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; National Breast Cancer Foundation; Agence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail; National Institute of Environmental Health Sciences; Swedish Cancer Foundation; Lon V. Smith Foundation; Fundación Mutua Madrileña; Ministère du Développement Économique, de l’Innovation et de l’Exportation; Institute of Biomedical Sciences, Academia Sinica; David F. and Margaret T. Grohne Family Foundation; Consejo Nacional de Ciencia y Tecnología; Sundhed og Sygdom, Det Frie Forskningsråd; Deutsches Krebsforschungszentrum; University College London; National Research Foundation of Korea; California Department of Public Health; Genome Canada; Cancer Council Tasmania; Itä-Suomen Yliopisto; Programme Grants for Applied Research; Robert Bosch Stiftung; Center for Agroforestry, University of Missouri; Oulun Yliopisto; Fundación Cellex; Fisher Center for Alzheimer's Research Foundation; Centers for Disease Control and Prevention; National Institute for Health and Care Research; Susan G. Komen for the Cure; Taiwan Biobank; U.S. Department of Health and Human Services; Agence Nationale de la Recherche; U.S. Army; Landspítali Háskólasjúkrahús; National Center for Advancing Translational Sciences; Bundesministerium für Bildung und Forschung; Ministry of Education, Culture, Sports, Science and Technology; Ovarian Cancer Research Fund; National Institutes of Health; Division of Cancer Prevention, National Cancer Institute; Cancer Research UK; Breast Cancer Research Foundation; Rijksuniversiteit Groningen; Deutscher Akademischer Austauschdienst; Yayasan Sime Darby; Xunta de Galicia; Dr. Ralph and Marian Falk Medical Research Trust; Fonds Wetenschappelijk Onderzoek","keywords":"TSG101; Nucleofection; Hyporeflexia; Gestational period; Subpoena; Proteogenomics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001255145,0.0002341088,0.0005615226,0.0007187051,0.0003534349,0.0005576313,0.0002137367,0.00021405,0.002094827],"category_scores_gemma":[0.001862989,0.0001549283,0.0008506407,0.001809338,0.0001943006,0.0001592313,0.00051964,0.0004593607,0.0002593065],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002393041,"about_ca_system_score_gemma":0.0003529248,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003493205,"about_ca_topic_score_gemma":0.006860353,"domain_scores_codex":[0.999307,0.0002920011,0.00004265197,0.0002066826,0.00009511493,0.00005662115],"domain_scores_gemma":[0.9987067,0.0005651096,0.0002573627,0.0002517656,0.00009876663,0.0001201657],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009354728,0.0000436542,0.9036463,0.0002375839,0.004404335,0.0004912889,0.000178145,0.0008143184,0.06834189,0.0006306383,0.002074492,0.01820173],"study_design_scores_gemma":[0.00002773819,0.0000781582,0.9926005,0.00001169136,0.0007576737,0.000369099,0.00007797535,0.0009368066,0.00217137,0.0004786818,0.002480803,0.000009476676],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9682663,0.003786895,0.01223038,0.0004790382,0.0000689759,0.00003587963,0.01309774,0.0001708209,0.001863941],"genre_scores_gemma":[0.988235,0.0007296181,0.003758669,0.0001713209,0.00002457472,0.00005539489,0.005970611,0.00004499876,0.00100973],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003493205,"threshold_uncertainty_score":0.007007897,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006971722543350013,"score_gpt":0.2081454877374095,"score_spread":0.2011737651940595,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). 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